6DWV
Crystal structure of the LigJ Hydratase in the Apo state
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | d6dwvb_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Metallo-dependent hydrolases | automated matches | automated matches | (Sphingobium sp. SYK-6 ) [TaxId: 627192 ], | SCOPe (2.08) |
B [auth A] | d6dwva_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Metallo-dependent hydrolases | automated matches | automated matches | (Sphingobium sp. SYK-6 ) [TaxId: 627192 ], | SCOPe (2.08) |
C | d6dwvc_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Metallo-dependent hydrolases | automated matches | automated matches | (Sphingobium sp. SYK-6 ) [TaxId: 627192 ], | SCOPe (2.08) |
D | d6dwvd_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Metallo-dependent hydrolases | automated matches | automated matches | (Sphingobium sp. SYK-6 ) [TaxId: 627192 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth B] | SCOP2B Superfamily | Metallo-dependent hydrolases | 8061216 | 3000428 | SCOP2B (2022-06-29) |
B [auth A] | SCOP2B Superfamily | Metallo-dependent hydrolases | 8061216 | 3000428 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Metallo-dependent hydrolases | 8061216 | 3000428 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Metallo-dependent hydrolases | 8061216 | 3000428 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | PF04909 | e6dwvB1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF04909 | ECOD (1.6) |
B [auth A] | PF04909 | e6dwvA1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF04909 | ECOD (1.6) |
C | PF04909 | e6dwvC1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF04909 | ECOD (1.6) |
D | PF04909 | e6dwvD1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF04909 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth A], C, D | PF04909 | Amidohydrolase (Amidohydro_2) | Amidohydrolase | These proteins are amidohydrolases that are related to Pfam:PF01979 [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth B], B [auth A], C, D | 4-oxalomesaconate hydratase |
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InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], B [auth A], C, D | IPR032465 | 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase | Family |
A [auth B], B [auth A], C, D | IPR006680 | Amidohydrolase-related | Domain |
A [auth B], B [auth A], C, D | IPR032466 | Metal-dependent hydrolase | Homologous Superfamily |