6DNV
Crystal Structure of Neisseria meningitidis DsbD n-terminal domain in the reduced form
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6dnva1 | All beta proteins | Immunoglobulin-like beta-sandwich | Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) | automated matches | automated matches | (Neisseria meningitidis alpha14 ) [TaxId: 662598 ], | SCOPe (2.08) |
A | d6dnva2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Neisseria meningitidis alpha14 ) [TaxId: 662598 ], | SCOPe (2.08) |
B | d6dnvb1 | All beta proteins | Immunoglobulin-like beta-sandwich | Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) | automated matches | automated matches | (Neisseria meningitidis alpha14 ) [TaxId: 662598 ], | SCOPe (2.08) |
B | d6dnvb2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Neisseria meningitidis alpha14 ) [TaxId: 662598 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Thiol:disulfide interchange protein DsbD N-terminal domain (DsbD-alpha) | 8080435 | 3002068 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | Thiol:disulfide interchange protein DsbD N-terminal domain (DsbD-alpha) | 8080435 | 3002068 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF11412 | e6dnvA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF11412 | ECOD (1.6) |
B | PF11412 | e6dnvB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF11412 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.1250 | Mainly Beta | Sandwich | Immunoglobulin-like | Thiol:disulfide interchange protein DsbD, N-terminal domain | CATH (4.3.0) |
B | 2.60.40.1250 | Mainly Beta | Sandwich | Immunoglobulin-like | Thiol:disulfide interchange protein DsbD, N-terminal domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF11412 | Thiol:disulfide interchange protein DsbD, N-terminal (DsbD_N) | Thiol:disulfide interchange protein DsbD, N-terminal | This entry represents the N-terminal domain of DsbD, a transmembrane electron transporter [1-3]. DsbD binds to a DsbC dimer and selectively activates it using electrons from the cytoplasm. The N-terminal domain of DsbD (DsbDN) is capable of forming d ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR028250 | Thiol:disulfide interchange protein DsbD, N-terminal domain | Domain | |
IPR013766 | Thioredoxin domain | Domain | |
IPR003834 | Cytochrome C biogenesis protein, transmembrane domain | Domain | |
IPR012336 | Thioredoxin-like fold | Domain | |
IPR022910 | Thiol:disulphide interchange protein DsbD | Family | |
IPR035671 | DsbD gamma | Domain | |
IPR036249 | Thioredoxin-like superfamily | Homologous Superfamily | |
IPR036929 | Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily | Homologous Superfamily |