6DGC
Crystal structure of the C-terminal catalytic domain of ISC1926 TnpA, an IS607-like serine recombinase
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00239 | e6dgcA1 | A: a/b three-layered sandwiches | X: Resolvase-like (From Topology) | H: Resolvase-like (From Topology) | T: Resolvase-like | F: PF00239 | ECOD (1.6) |
D | PF00239 | e6dgcD1 | A: a/b three-layered sandwiches | X: Resolvase-like (From Topology) | H: Resolvase-like (From Topology) | T: Resolvase-like | F: PF00239 | ECOD (1.6) |
B | PF00239 | e6dgcB1 | A: a/b three-layered sandwiches | X: Resolvase-like (From Topology) | H: Resolvase-like (From Topology) | T: Resolvase-like | F: PF00239 | ECOD (1.6) |
C | PF00239 | e6dgcC1 | A: a/b three-layered sandwiches | X: Resolvase-like (From Topology) | H: Resolvase-like (From Topology) | T: Resolvase-like | F: PF00239 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.1390 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Resolvase, N-terminal catalytic domain | CATH (4.3.0) |
A | 1.10.287.2170 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | CATH (4.3.0) | |
D | 3.40.50.1390 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Resolvase, N-terminal catalytic domain | CATH (4.3.0) |
D | 1.10.287.2170 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | CATH (4.3.0) | |
B | 3.40.50.1390 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Resolvase, N-terminal catalytic domain | CATH (4.3.0) |
B | 1.10.287.2170 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | CATH (4.3.0) | |
C | 3.40.50.1390 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Resolvase, N-terminal catalytic domain | CATH (4.3.0) |
C | 1.10.287.2170 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00239 | Resolvase, N terminal domain (Resolvase) | Resolvase, N terminal domain | The N-terminal domain of the resolvase family (this family) contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase - see Pfam:PF02796. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
ISC1926 TnpA C-terminal catalytic domain | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR009061 | Putative DNA-binding domain superfamily | Homologous Superfamily | |
IPR010093 | SinI-like, DNA-binding domain | Domain | |
IPR036162 | Resolvase-like, N-terminal catalytic domain superfamily | Homologous Superfamily | |
IPR006118 | Recombinase, conserved site | Conserved Site | |
IPR041657 | Helix-turn-helix domain, group 17 | Domain | |
IPR006119 | Resolvase, N-terminal catalytic domain | Domain | |
IPR048046 | IS607 transposase | Family | |
IPR041718 | IS607-like transposase, catalytic domain | Domain |