6DGC | pdb_00006dgc

Crystal structure of the C-terminal catalytic domain of ISC1926 TnpA, an IS607-like serine recombinase

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DAnoctamine6dgcD1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
CAnoctamine6dgcC1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
BAnoctamine6dgcB1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
APkinasee6dgcA1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: ADP-ribosylationT: ADP-ribosylationF: PkinaseECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D3.40.50.1390 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Resolvase, N-terminal catalytic domainCATH (4.3.0)
D1.10.287.2170 Mainly Alpha Orthogonal Bundle Helix Hairpins CATH (4.3.0)
C3.40.50.1390 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Resolvase, N-terminal catalytic domainCATH (4.3.0)
C1.10.287.2170 Mainly Alpha Orthogonal Bundle Helix Hairpins CATH (4.3.0)
B3.40.50.1390 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Resolvase, N-terminal catalytic domainCATH (4.3.0)
B1.10.287.2170 Mainly Alpha Orthogonal Bundle Helix Hairpins CATH (4.3.0)
A3.40.50.1390 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Resolvase, N-terminal catalytic domainCATH (4.3.0)
A1.10.287.2170 Mainly Alpha Orthogonal Bundle Helix Hairpins CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
ISC1926 TnpA C-terminal catalytic domain -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR009061Putative DNA-binding domain superfamilyHomologous Superfamily
A, B, C, D
IPR010093SinI-like, DNA-binding domainDomain
A, B, C, D
IPR036162Resolvase-like, N-terminal catalytic domain superfamilyHomologous Superfamily
A, B, C, D
IPR006118Recombinase, conserved siteConserved Site
A, B, C, D
IPR041657Helix-turn-helix domain, group 17Domain
A, B, C, D
IPR006119Resolvase, N-terminal catalytic domainDomain
A, B, C, D
IPR048046IS607 transposaseFamily
A, B, C, D
IPR041718IS607-like transposase, catalytic domainDomain
A, B, C, D
IPR051491Site-specific recombinase/transposase-relatedFamily