6DE6
2.1 A resolution structure of histamine dehydrogenase from Rhizobium sp. 4-9
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00724 | e6de6A1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF00724 | ECOD (1.6) |
A | PF22620 | e6de6A3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: FAD/NAD(P)-binding domain | F: PF22620 | ECOD (1.6) |
A | PF13450 | e6de6A2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: Nucleotide-binding domain | F: PF13450 | ECOD (1.6) |
B | PF00724 | e6de6B3 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF00724 | ECOD (1.6) |
B | PF22620 | e6de6B4 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: FAD/NAD(P)-binding domain | F: PF22620 | ECOD (1.6) |
B | PF13450 | e6de6B2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: Nucleotide-binding domain | F: PF13450 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00724 | NADH:flavin oxidoreductase / NADH oxidase family (Oxidored_FMN) | NADH:flavin oxidoreductase / NADH oxidase family | - | Domain | |
PF22620 | OYE-like second alpha/beta domain (OYE-like_second_a-b) | OYE-like second alpha/beta domain | This domain is found in a group of diverse dehydrogenases from the old yellow enzyme (OYE)-like family, such as histamine dehydrogenase from Nocardioides simplex, trimethylamine dehydrogenase from Methylophilus methylotrophus (sp. W(3)A(1)) and 2-nap ... | Domain | |
PF13450 | NAD(P)-binding Rossmann-like domain (NAD_binding_8) | NAD(P)-binding Rossmann-like domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR037348 | TMADH/DMDH, FMN-binding domain | Domain | |
IPR001155 | NADH:flavin oxidoreductase/NADH oxidase, N-terminal | Domain | |
IPR013785 | Aldolase-type TIM barrel | Homologous Superfamily | |
IPR036188 | FAD/NAD(P)-binding domain superfamily | Homologous Superfamily |