6DA6 | pdb_00006da6

Crystal structure of the TtnD decarboxylase from the tautomycetin biosynthesis pathway of Streptomyces griseochromogenes, apo form at 2.6 A resolution (P212121)

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D		e6da6D3	A: L-aspartase middle domain-like	X: gp11/gp12 receptor-binding domain	H: gp11/gp12 receptor-binding domain	T: OB_NTP_bind	F:	ECOD (20:10:01)
D		e6da6D2	A: Nat/Ivy	X: Acyl-CoA N-acyltransferases (Nat)	H: Acyl-CoA N-acyltransferases (Nat)	T: DNA_gyraseB_C,Toprim	F:	ECOD (20:10:01)
C		e6da6C3	A: L-aspartase middle domain-like	X: gp11/gp12 receptor-binding domain	H: gp11/gp12 receptor-binding domain	T: OB_NTP_bind	F:	ECOD (20:10:01)
C		e6da6C2	A: Nat/Ivy	X: Acyl-CoA N-acyltransferases (Nat)	H: Acyl-CoA N-acyltransferases (Nat)	T: DNA_gyraseB_C,Toprim	F:	ECOD (20:10:01)
B		e6da6B1	A: L-aspartase middle domain-like	X: gp11/gp12 receptor-binding domain	H: gp11/gp12 receptor-binding domain	T: OB_NTP_bind	F:	ECOD (20:10:01)
B		e6da6B2	A: Nat/Ivy	X: Acyl-CoA N-acyltransferases (Nat)	H: Acyl-CoA N-acyltransferases (Nat)	T: DNA_gyraseB_C,Toprim	F:	ECOD (20:10:01)
A		e6da6A3	A: L-aspartase middle domain-like	X: gp11/gp12 receptor-binding domain	H: gp11/gp12 receptor-binding domain	T: 7tm_1,Rhodopsin_N	F:	ECOD (20:10:01)
A		e6da6A2	A: Nat/Ivy	X: Acyl-CoA N-acyltransferases (Nat)	H: Acyl-CoA N-acyltransferases (Nat)	T: DNA_gyraseB_C,Toprim	F:	ECOD (20:10:01)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	UbiD-like decarboxylase	binding nucleoside phosphate binding nucleotide binding heterocyclic compound binding small molecule binding cation binding ion binding metal ion binding carboxy-lyase activity pyrrole-2-carboxylate decarboxylase activity lyase activity catalytic activity carbon-carbon lyase activity	oxoacid metabolic process ferulate metabolic process phenol-containing compound metabolic process carboxylic acid metabolic process olefinic compound metabolic process metabolic process cellular process small molecule metabolic process monocarboxylic acid metabolic process organic acid metabolic process phenylpropanoid catabolic process phenylpropanoid metabolic process catabolic process benzene-containing compound metabolic process oxoacid metabolic process ferulate metabolic process phenol-containing compound metabolic process carboxylic acid metabolic process olefinic compound metabolic process metabolic process cellular process small molecule metabolic process monocarboxylic acid metabolic process organic acid metabolic process phenylpropanoid catabolic process phenylpropanoid metabolic process catabolic process benzene-containing compound metabolic process organic acid catabolic process secondary metabolic process monocarboxylic acid catabolic process carboxylic acid catabolic process olefinic compound catabolic process small molecule catabolic process cinnamic acid catabolic process cinnamic acid metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR049383	3-octaprenyl-4-hydroxybenzoate carboxy-lyase-like, N-terminal domain	Domain
A, B, C, D	IPR032903	Ferulic acid decarboxylase-like	Family
A, B, C, D	IPR048304	3-octaprenyl-4-hydroxybenzoate carboxy-lyase-like, Rift-related domain	Domain
A, B, C, D	IPR002830	UbiD decarboxylyase family	Family
A, B, C, D	IPR049381	3-octaprenyl-4-hydroxybenzoate carboxy-lyase-like, C-terminal domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.