Crystal structure of spermidine/spermine N-acetyltransferase SpeG from Yersinia pestis in complex with calcium ions.
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d6d72a_ | Alpha and beta proteins (a+b) | Acyl-CoA N-acyltransferases (Nat) | Acyl-CoA N-acyltransferases (Nat) | automated matches | automated matches | (Yersinia pestis ) [TaxId: 632 ], | SCOPe (2.08) |
| B | d6d72b1 | Alpha and beta proteins (a+b) | Acyl-CoA N-acyltransferases (Nat) | Acyl-CoA N-acyltransferases (Nat) | automated matches | automated matches | (Yersinia pestis ) [TaxId: 632 ], | SCOPe (2.08) |
| B | d6d72b2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Yersinia pestis ) [TaxId: 632 ], | SCOPe (2.08) |
| C | d6d72c1 | Alpha and beta proteins (a+b) | Acyl-CoA N-acyltransferases (Nat) | Acyl-CoA N-acyltransferases (Nat) | automated matches | automated matches | (Yersinia pestis ) [TaxId: 632 ], | SCOPe (2.08) |
| C | d6d72c2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Yersinia pestis ) [TaxId: 632 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2B Superfamily | Acyl-CoA N-acyltransferases (Nat) | 8060303 | 3000403 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Acyl-CoA N-acyltransferases (Nat) | 8060303 | 3000403 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Acyl-CoA N-acyltransferases (Nat) | 8060303 | 3000403 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | VP4_haemagglut | e6d72A1 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Peptidyl-tRNA hydrolase-like | T: Peptidyl-tRNA hydrolase-like | F: VP4_haemagglut | ECOD (v294.1) |
| B | VP4_haemagglut | e6d72B1 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Peptidyl-tRNA hydrolase-like | T: Peptidyl-tRNA hydrolase-like | F: VP4_haemagglut | ECOD (v294.1) |
| C | V-set | e6d72C1 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Ribosomal protein S5 domain 2-like | T: Ribosomal protein S5 domain 2-like | F: V-set | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.40.630.30 | Alpha Beta | 3-Layer(aba) Sandwich | Aminopeptidase | Gcn5-related N-acetyltransferase (GNAT) | CATH (4.3.0) |
| B | 3.40.630.30 | Alpha Beta | 3-Layer(aba) Sandwich | Aminopeptidase | Gcn5-related N-acetyltransferase (GNAT) | CATH (4.3.0) |
| C | 3.40.630.30 | Alpha Beta | 3-Layer(aba) Sandwich | Aminopeptidase | Gcn5-related N-acetyltransferase (GNAT) | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF13302 | Acetyltransferase (GNAT) domain (Acetyltransf_3) | Acetyltransferase (GNAT) domain | This domain catalyses N-acetyltransferase reactions. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Spermidine N1-acetyltransferase |
| - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR016181 | Acyl-CoA N-acyltransferase | Homologous Superfamily | |
| IPR000182 | GNAT domain | Domain |
