Structure of the nvTRPM2 channel in complex with Ca2+
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | UNK_F_TYPE | e6co7A2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Ankyrin repeat (From Topology) | T: Ankyrin repeat | F: UNK_F_TYPE | ECOD (1.6) |
| A | Ion_trans | e6co7A3 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: Ion_trans | ECOD (1.6) |
| A | UNK_F_TYPE | e6co7A1 | A: a/b three-layered sandwiches | X: MCP/YpsA-related (From Topology) | H: MCP/YpsA-related (From Topology) | T: MCP/YpsA-related | F: UNK_F_TYPE | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF08016 | Polycystin cation channel (PKD_channel) | Polycystin cation channel | - | Family | |
| PF18139 | SLOG in TRPM (LSDAT_euk) | SLOG in TRPM | Family in the SLOG superfamily, found in several eukaryotic channels including diverse ciliate channels and the TRPM class of animal ion channels. Positioned near the N-terminus of all TRPM channels, it is predicted to play a regulatory role for the ... | Domain | |
| PF00520 | Ion transport protein (Ion_trans) | Ion transport protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR005821 | Ion transport domain | Domain | |
| IPR000086 | NUDIX hydrolase domain | Domain | |
| IPR041491 | TRPM, SLOG domain | Domain | |
| IPR015797 | NUDIX hydrolase-like domain superfamily | Homologous Superfamily | |
| IPR050927 | Transient receptor potential cation channel M | Family |
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Transmembrane | Alpha-helical polytopic | Ion channel (VIC) superfamily | Transient receptor potential channels |














