The X-ray crystal structure of the Streptococcus pneumoniae Fatty Acid Kinase (Fak) B3 protein loaded with linoleic acid to 1.47 Angstrom resolution
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B [auth D] | d6cngd_ | Alpha and beta proteins (a/b) | DAK1/DegV-like | DAK1/DegV-like | automated matches | automated matches | (Streptococcus pneumoniae R6 ) [TaxId: 171101 ], | SCOPe (2.08) |
| A | d6cnga_ | Alpha and beta proteins (a/b) | DAK1/DegV-like | DAK1/DegV-like | automated matches | automated matches | (Streptococcus pneumoniae R6 ) [TaxId: 171101 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B [auth D] | JAB | e6cngD1 | A: alpha bundles | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: JAB | ECOD (develop294) |
| A | FIVAR | e6cngA1 | A: alpha bundles | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: FIVAR | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B [auth D] | 3.40.50.10440 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Dihydroxyacetone kinase | CATH (utative) |
| B [auth D] | 2.20.28.50 | Mainly Beta | Single Sheet | Rubrerythrin, domain 2 | DegV, N-terminal domain, peripheral subdomain | CATH (utative) |
| B [auth D] | 3.30.1180.10 | Alpha Beta | 2-Layer Sandwich | Hypothetical Protein Tm841 | Chain: A | CATH (utative) |
| A | 3.40.50.10440 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Dihydroxyacetone kinase | CATH (utative) |
| A | 2.20.28.50 | Mainly Beta | Single Sheet | Rubrerythrin, domain 2 | DegV, N-terminal domain, peripheral subdomain | CATH (utative) |
| A | 3.30.1180.10 | Alpha Beta | 2-Layer Sandwich | Hypothetical Protein Tm841 | Chain: A | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| A, B [auth D] | PF02645 | Uncharacterised protein, DegV family COG1307 (DegV) | Uncharacterised protein, DegV family COG1307 | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| A, B [auth D] | Fatty Acid Kinase (Fak) B3 protein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| A, B [auth D] | IPR050270 | DegV domain-containing | Family |
| A, B [auth D] | IPR003797 | DegV | Family |
| A, B [auth D] | IPR043168 | DegV, C-terminal domain | Homologous Superfamily |
