6CBC

Crystal structure of an N-terminal fragment of Vps13.

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF12624,PF16908e6cbcA1 A: beta meandersX: N-terminal region of lipid transporter Vps13 (From Topology)H: N-terminal region of lipid transporter Vps13 (From Topology)T: N-terminal region of lipid transporter Vps13F: PF12624,PF16908ECOD (1.6)
BPF12624,PF16908e6cbcB1 A: beta meandersX: N-terminal region of lipid transporter Vps13 (From Topology)H: N-terminal region of lipid transporter Vps13 (From Topology)T: N-terminal region of lipid transporter Vps13F: PF12624,PF16908ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF16908Vacuolar sorting-associated protein 13, extended-chorein (VPS13_ext_chorein)Vacuolar sorting-associated protein 13, extended-chorein- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Vacuolar protein sorting-associated protein

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR031646Vacuolar protein sorting-associated protein 13, extended choreinDomain
A, B
IPR031645Vacuolar protein sorting-associated protein 13, DH-like domainDomain
A, B
IPR017148Vacuolar protein sorting-associated protein 13, fungiFamily
A, B
IPR049424Intermembrane lipid transfer protein VPS13, C-terminalDomain
A, B
IPR026854Vacuolar protein sorting-associated protein 13-like, N-terminal domainDomain
A, B
IPR031642VPS13, middle RBG modulesDomain
A, B
IPR026847Vacuolar protein sorting-associated protein 13Family
A, B
IPR009543Vacuolar protein sorting-associated protein 13, VPS13 adaptor binding domainDomain