6CA8
Crystal structure of Plasmodium falciparum topoisomerase II DNA-binding, cleavage and re-ligation domain
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6ca8a_ | Multi-domain proteins (alpha and beta) | Type II DNA topoisomerase C-terminal domain-like | Type II DNA topoisomerase C-terminal domain-like | automated matches | automated matches | malaria parasite P. falciparum (Plasmodium falciparum ) [TaxId: 5833 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00521 | e6ca8A5 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00521 | ECOD (1.6) |
A | PF00521 | e6ca8A4 | A: alpha bundles | X: alpha-helical domain in type II DNA topoisomerase (From Topology) | H: alpha-helical domain in type II DNA topoisomerase (From Topology) | T: alpha-helical domain in type II DNA topoisomerase | F: PF00521 | ECOD (1.6) |
A | PF16898 | e6ca8A1 | A: a+b two layers | X: SSHS domain | H: SSHS domain in type II DNA topoisomerase (From Topology) | T: SSHS domain in type II DNA topoisomerase | F: PF16898 | ECOD (1.6) |
A | PF00521 | e6ca8A2 | A: a+b two layers | X: a+b domain in type II DNA topoisomerase (From Topology) | H: a+b domain in type II DNA topoisomerase (From Topology) | T: a+b domain in type II DNA topoisomerase | F: PF00521 | ECOD (1.6) |
A | PF01751,PF16898 | e6ca8A3 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: Toprim domain | F: PF01751,PF16898 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01751 | Toprim domain (Toprim) | Toprim domain | - | Family | |
PF16898 | C-terminal associated domain of TOPRIM (TOPRIM_C) | C-terminal associated domain of TOPRIM | - | Family | |
PF00521 | DNA gyrase/topoisomerase IV, subunit A (DNA_topoisoIV) | DNA gyrase/topoisomerase IV, subunit A | - | Family |