Cryo-EM structure of PRC2 bound to cofactors AEBP2 and JARID2 in the Extended Active State
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| F [auth M] | SCOP2B Superfamily | VEFS box-like | 8090819 | 3002459 | SCOP2B (2022-06-29) |
| G [auth N] | SCOP2B Superfamily | WD40 repeat-like | 8053350 | 3001694 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| F [auth M] | Actin | e6c24M1 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II | H: Rubredoxin-related | T: Tetrapyrrole methylase C-terminal domain | F: Actin | ECOD (v294.1) |
| L [auth C] | Pkinase | e6c24C1 | A: a/b three-layered sandwiches | X: Protein kinase/SAICAR synthase/ATP-grasp | H: Protein kinase/SAICAR synthase/ATP-grasp | T: Protein kinase | F: Pkinase | ECOD (v294.1) |
| D [auth K] | Actin | e6c24K1 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II | H: Rubredoxin-related | T: Tetrapyrrole methylase C-terminal domain | F: Actin | ECOD (v294.1) |
| E [auth L] | Actin | e6c24L1 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II | H: Rubredoxin-related | T: Tetrapyrrole methylase C-terminal domain | F: Actin | ECOD (v294.1) |
| G [auth N] | Actin | e6c24N1 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II | H: Rubredoxin-related | T: Tetrapyrrole methylase C-terminal domain | F: Actin | ECOD (v294.1) |
| I [auth P] | NADHdh | e6c24P1 | A: a/b three-layered sandwiches | X: Family A G protein-coupled receptor-like | H: Sodium/proton antiporter subunits-like | T: NADH-quinone oxidoreductase subunit 8 (Nqo8)-related | F: NADHdh | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| E [auth L] | 2.130.10.10 | Mainly Beta | 7 Propeller | Methylamine Dehydrogenase | Chain H | CATH (4.3.0) |
| G [auth N] | 2.130.10.10 | Mainly Beta | 7 Propeller | Methylamine Dehydrogenase | Chain H | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| D [auth K], L [auth C] | PF18264 | CXC domain (preSET_CXC) | CXC domain | This domain is found to the N-terminus of the SET domain in the EZH2 protein [1]. It is a zinc binding domain. | Domain |
| D [auth K], L [auth C] | PF00856 | SET domain (SET) | SET domain | - | Family |
| D [auth K], L [auth C] | PF11616 | WD repeat binding protein EZH2 (EZH2_WD-Binding) | WD repeat binding protein EZH2 | - | Family |
| E [auth L] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
| G [auth N] | PF12265 | Histone-binding protein RBBP4 or subunit C of CAF1 complex (CAF1C_H4-bd) | Histone-binding protein RBBP4 or subunit C of CAF1 complex | - | Repeat |
| G [auth N] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |














