6C0F | pdb_00006c0f

Yeast nucleolar pre-60S ribosomal subunit (state 2)

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
I [auth F]SCOP2B SuperfamilyRibosomal L30p/L7e protein, N-terminal domain-lke 8052916 3002152 SCOP2B (2022-06-29)
I [auth F]SCOP2B SuperfamilyRibosomal protein L30p/L7e 8052917 3001378 SCOP2B (2022-06-29)
H [auth E]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053109 3000334 SCOP2B (2022-06-29)
F [auth C]SCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like 8052815 3002143 SCOP2B (2022-06-29)
F [auth C]SCOP2B SuperfamilyRibosomal protein L4 8052816 3001146 SCOP2B (2022-06-29)
E [auth B]SCOP2B SuperfamilyTranslational proteins 8078363 3000811 SCOP2B (2022-06-29)
PA [auth y]SCOP2B SuperfamilyPentein 8036230 3000640 SCOP2B (2022-06-29)
HA [auth o]SCOP2B SuperfamilyRNA-binding domain, RBD 8061969 3000110 SCOP2B (2022-06-29)
CA [auth i]SCOP2B SuperfamilyRibosomal protein L36e 8053115 3002161 SCOP2B (2022-06-29)
AA [auth f]SCOP2B SuperfamilyTranslational proteins 8087451 3000811 SCOP2B (2022-06-29)
V [auth Y]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8076760 3000334 SCOP2B (2022-06-29)
T [auth V]SCOP2B Superfamily50S Ribosomal protein L14-like 8103364 3000433 SCOP2B (2022-06-29)
R [auth Q]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8095970 3001045 SCOP2B (2022-06-29)
P [auth O]SCOP2B SuperfamilyRibosomal protein L13 8066053 3001134 SCOP2B (2022-06-29)
O [auth N]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8082481 3000210 SCOP2B (2022-06-29)
J [auth G]SCOP2B SuperfamilyL30e-like 8063962 3001739 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth F]Ribosomal_L30_1e6c0fF1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30_1ECOD (1.6)
H [auth E]Ribosomal_L6ee6c0fE1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L6eECOD (1.6)
F [auth C]Ribosomal_L4e6c0fC3 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
F [auth C]Ribos_L4_asso_Ce6c0fC2 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: Ribos_L4_asso_CECOD (1.6)
E [auth B]Ribosomal_L3e6c0fB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
QA [auth z]UNK_F_TYPEe6c0fz1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: UNK_F_TYPEECOD (1.6)
PA [auth y]eIF-6e6c0fy1 A: a+b duplicates or obligate multimersX: Pentein (From Topology)H: Pentein (From Topology)T: PenteinF: eIF-6ECOD (1.6)
NA [auth v]Brixe6c0fv1 A: a/b three-layered sandwichesX: Anticodon-binding domain of Class II aaRS (From Topology)H: Anticodon-binding domain of Class II aaRS (From Topology)T: Anticodon-binding domain of Class II aaRSF: BrixECOD (1.6)
D [auth A]ANAPC4_WD40_11e6c0fA1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 8-bladedF: ANAPC4_WD40_11ECOD (1.6)
LA [auth t]Ribosomal_L30_1e6c0ft1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30_1ECOD (1.6)
IA [auth p]UNK_F_TYPEe6c0fp3 A: alpha duplicates or obligate multimersX: RNA helicase Hera dimerization domain (From Topology)H: RNA helicase Hera dimerization domain (From Topology)T: RNA helicase Hera dimerization domainF: UNK_F_TYPEECOD (1.6)
IA [auth p]DEADe6c0fp2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: DEADECOD (1.6)
IA [auth p]Helicase_C_1e6c0fp1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Helicase_C_1ECOD (1.6)
DA [auth j]Ribosomal_L37ee6c0fj1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37eECOD (1.6)
CA [auth i]Ribosomal_L36ee6c0fi1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: Ribosomal_L36eECOD (1.6)
BA [auth h]Ribosomal_L29_2e6c0fh1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29_2ECOD (1.6)
AA [auth f]Ribosomal_L35Aee6c0ff1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L35AeECOD (1.6)
Z [auth e]Ribosomal_L32ee6c0fe1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: Ribosomal_L32eECOD (1.6)
V [auth Y]Ribosomal_L26e6c0fY1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L26ECOD (1.6)
T [auth V]Ribosomal_L14e6c0fV1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
SRibosomal_L18Ae6c0fS2 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: Ribosomal_L18AECOD (1.6)
R [auth Q]Ribosomal_L18e6c0fQ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
Q [auth P]Ribosomal_L22e6c0fP1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
P [auth O]Ribosomal_L13e6c0fO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
O [auth N]Ribosomal_L15ee6c0fN1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L15eECOD (1.6)
N [auth M]Ribosomal_L14ee6c0fM1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L14eECOD (1.6)
M [auth L]Ribosomal_L13ee6c0fL1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: Ribosomal_L13eECOD (1.6)
L [auth K]Ribosomal_L1_2nde6c0fK2 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: Ribosomal_L1_2ndECOD (1.6)
L [auth K]Ribosomal_L1_1st_1e6c0fK1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Rossmann-like domain in Ribosomal protein L1 (From Topology)T: Rossmann-like domain in Ribosomal protein L1F: Ribosomal_L1_1st_1ECOD (1.6)
J [auth G]Ribosomal_L7Ae_1e6c0fG1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7Ae_1ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
G [auth D]3.30.390.110 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (utative)
E [auth B]2.40.30.10 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu) domain 3CATH (utative)
E [auth B]3.30.1430.10 Alpha Beta 2-Layer Sandwich Ribosomal Protein L3 Chain: BCATH (utative)
PA [auth y]3.75.10.10 Alpha Beta 5-stranded Propeller L-arginine/glycine Amidinotransferase Chain ACATH (4.3.0)
CA [auth i]1.10.10.1760 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Ribosomal protein L36CATH (utative)
BA [auth h]6.10.250.3450 Special Helix non-globular Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
AA [auth f]2.40.10.190 Mainly Beta Beta Barrel Thrombin, subunit H translation elongation factor selb, chain A, domain 4CATH (4.3.0)
V [auth Y]2.30.30.30 Mainly Beta Roll SH3 type barrels. CATH (4.3.0)
T [auth V]2.40.150.20 Mainly Beta Beta Barrel Ribosomal Protein L14 Ribosomal protein L14/L23CATH (4.3.0)
S3.10.20.10 Alpha Beta Roll Ubiquitin-like (UB roll) CATH (4.3.0)
R [auth Q]3.100.10.10 Alpha Beta Ribosomal Protein L15 Chain: K domain 2CATH (4.3.0)
P [auth O]3.90.1180.10 Alpha Beta Alpha-Beta Complex Ribosomal Protein L13p Chain: ACATH (4.3.0)
P [auth O]1.20.5.4280 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
O [auth N]3.40.1120.10 Alpha Beta 3-Layer(aba) Sandwich Ribosomal protein L15e Ribosomal protein L15CATH (4.3.0)
N [auth M]2.30.30.30 Mainly Beta Roll SH3 type barrels. CATH (4.3.0)
K [auth I]3.40.50.10480 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Brix domainCATH (utative)
J [auth G]3.30.1330.30 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: ACATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I [auth F]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1]. Domain
I [auth F]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
I [auth F]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35AeThis entry represents the ribosomal eL33 previously known as L35A, eukaryotic and archaebacterial ribosomal proteins. Domain
H [auth E]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
H [auth E]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
G [auth D]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
G [auth D]PF04874Mak16 protein C-terminal region (Mak16)Mak16 protein C-terminal region- Family
F [auth C]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins. Domain
F [auth C]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
E [auth B]PF04427Brix domain (Brix)Brix domainDomain
W [auth 7]PF09420Ribosome biogenesis protein Nop16 (Nop16)Ribosome biogenesis protein Nop16- Family
V [auth Y]PF01912eIF-6 family (eIF-6)eIF-6 family- Family
V [auth Y]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
V [auth Y]PF00467KOW motif (KOW)KOW motif- Family
U [auth W]PF08155NOGCT (NUC087) domain (NOGCT)NOGCT (NUC087) domainThis C terminal domain is found in the NOG subfamily of nucleolar GTP-binding proteins [1]. Domain
T [auth V]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
T [auth V]PF04427Brix domain (Brix)Brix domainDomain
PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A. Domain
Q [auth P]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
Q [auth P]PF00270DEAD/DEAH box helicase (DEAD)DEAD/DEAH box helicaseMembers of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome ...Members of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome biogenesis, nucleocytoplasmic transport, translation, RNA decay and organellar gene expression.
Domain
P [auth O]PF00076RNA recognition motif (RRM_1)RNA recognition motifThe RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and pro ...The RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and protein components of snRNPs. The motif also appears in a few single stranded DNA binding proteins. The RRM structure consists of four strands and two helices arranged in an alpha/beta sandwich, with a third helix present during RNA binding in some cases The C-terminal beta strand (4th strand) and final helix are hard to align and have been omitted in the SEED alignment The LA proteins (Swiss:P05455) have an N terminal rrm which is included in the seed. There is a second region towards the C terminus that has some features characteristic of a rrm but does not appear to have the important structural core of a rrm. The LA proteins (Swiss:P05455) are one of the main autoantigens in Systemic lupus erythematosus (SLE), an autoimmune disease.
Domain
P [auth O]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
O [auth N]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
N [auth M]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
N [auth M]PF00467KOW motif (KOW)KOW motif- Family
L [auth K]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10. Domain
K [auth I]PF04427Brix domain (Brix)Brix domainDomain
J [auth G]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth F]60S ribosomal protein L7-A
H [auth E]60S ribosomal protein L6-A
G [auth D]Protein MAK16-
F [auth C]60S ribosomal protein L4-A
E [auth B]60S ribosomal protein L3
QA [auth z]Ribosomal RNA-processing protein 1-
PA [auth y]Eukaryotic translation initiation factor 6
OA [auth w]Ribosomal RNA-processing protein 15-
NA [auth v]Ribosome biogenesis protein SSF1
D [auth A]Ribosome biogenesis protein NSA1-
MA [auth u]Ribosome biogenesis protein RLP24
LA [auth t]Ribosome biogenesis protein RLP7
KA [auth s]Ribosome biogenesis protein ERB1
JA [auth q]Protein MAK11---
IA [auth p]ATP-dependent RNA helicase HAS1
HA [auth o]Ribosome biogenesis protein 15
GA [auth n]Pescadillo homolog
FA [auth m]rRNA-processing protein EBP2---
EA [auth x]Brx1-associated peptide---
DA [auth j]60S ribosomal protein L37-A
C [auth 6]ITS2---
CA [auth i]60S ribosomal protein L36-A
BA [auth h]60S ribosomal protein L35-A
AA [auth f]60S ribosomal protein L33-A
Z [auth e]60S ribosomal protein L32
Y [auth b]Ribosome biogenesis protein BRX1
X [auth 8]Ribosomal RNA-processing protein 14
W [auth 7]Nucleolar protein 16-
V [auth Y]60S ribosomal protein L26-A
U [auth W]Nucleolar GTP-binding protein 1
T [auth V]60S ribosomal protein L23-A
B [auth 2]5.8S rRNA---
60S ribosomal protein L20-A
R [auth Q]60S ribosomal protein L18-A
Q [auth P]60S ribosomal protein L17-A
P [auth O]60S ribosomal protein L16-A
O [auth N]60S ribosomal protein L15-A
N [auth M]60S ribosomal protein L14-A
M [auth L]60S ribosomal protein L13-A
L [auth K]Proteasome-interacting protein CIC1
K [auth I]Ribosome production factor 1
J [auth G]60S ribosomal protein L8-A
A [auth 1]Saccharomyces cerevisiae S288c 35S pre-ribosomal RNA miscRNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth F]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
I [auth F]IPR035808Large ribosomal subunit protein uL30, eukaryota/archaeaDomain
I [auth F]IPR005998Large ribosomal subunit protein uL30, eukaryotaFamily
I [auth F]IPR039699Large ribosomal subunit protein uL30Family
I [auth F]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotaDomain
I [auth F]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
I [auth F]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
H [auth E]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
H [auth E]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
H [auth E]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
H [auth E]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
H [auth E]IPR000915Large ribosomal subunit protein eL6Family
G [auth D]IPR006958Mak16 proteinFamily
G [auth D]IPR029004Ribosomal eL28/Mak16Domain
F [auth C]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
F [auth C]IPR002136Large ribosomal subunit protein uL4Family
F [auth C]IPR013000Large ribosomal subunit protein uL4, eukaryota/archaea, conserved siteConserved Site
F [auth C]IPR045240Large ribosomal subunit protein uL4, eukaryota/archaeaFamily
F [auth C]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
E [auth B]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
E [auth B]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
E [auth B]IPR000597Large ribosomal subunit protein uL3Family
E [auth B]IPR045077Large ribosomal subunit protein uL3, archaea/eukaryotaFamily
E [auth B]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
QA [auth z]IPR010301Ribosomal RNA processing protein 1Family
PA [auth y]IPR002769Translation initiation factor IF6Family
OA [auth w]IPR012459Ribosomal RNA-processing protein 15Family
NA [auth v]IPR007109Brix domainDomain
NA [auth v]IPR045112Protein Peter Pan-likeFamily
D [auth A]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
D [auth A]IPR037379WDR74/Nsa1Family
MA [auth u]IPR011017TRASH domainDomain
MA [auth u]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
MA [auth u]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
MA [auth u]IPR056366Large ribosomal subunit protein eL24Family
LA [auth t]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
LA [auth t]IPR035808Large ribosomal subunit protein uL30, eukaryota/archaeaDomain
LA [auth t]IPR039699Large ribosomal subunit protein uL30Family
LA [auth t]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
LA [auth t]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
KA [auth s]IPR019775WD40 repeat, conserved siteConserved Site
KA [auth s]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
KA [auth s]IPR028598WD repeat BOP1/Erb1Family
KA [auth s]IPR001680WD40 repeatRepeat
KA [auth s]IPR012953BOP1, N-terminal domainDomain
KA [auth s]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
IA [auth p]IPR000629ATP-dependent RNA helicase DEAD-box, conserved siteConserved Site
IA [auth p]IPR014014RNA helicase, DEAD-box type, Q motifDomain
IA [auth p]IPR025313ATP-dependent rRNA helicase SPB4-like, C-terminal extensionDomain
IA [auth p]IPR011545DEAD/DEAH-box helicase domainDomain
IA [auth p]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IA [auth p]IPR001650Helicase, C-terminal domain-likeDomain
IA [auth p]IPR014001Helicase superfamily 1/2, ATP-binding domainDomain
IA [auth p]IPR044773DDX18/Has1, DEAD-box helicase domainDomain
HA [auth o]IPR000504RNA recognition motif domainDomain
HA [auth o]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
HA [auth o]IPR034469Ribosome biogenesis protein 15, RNA recognition motifDomain
HA [auth o]IPR035979RNA-binding domain superfamilyHomologous Superfamily
GA [auth n]IPR010613PescadilloFamily
GA [auth n]IPR001357BRCT domainDomain
GA [auth n]IPR036420BRCT domain superfamilyHomologous Superfamily
DA [auth j]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
DA [auth j]IPR001569Large ribosomal subunit protein eL37Family
DA [auth j]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
DA [auth j]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
CA [auth i]IPR000509Large ribosomal subunit protein eL36Family
CA [auth i]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
BA [auth h]IPR001854Large ribosomal subunit protein uL29Family
BA [auth h]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
BA [auth h]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
BA [auth h]IPR045059Large ribosomal subunit protein uL29, eukaryotaFamily
AA [auth f]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
AA [auth f]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
AA [auth f]IPR001780Large ribosomal subunit protein eL33Family
AA [auth f]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
Z [auth e]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
Z [auth e]IPR001515Large ribosomal subunit protein eL32Family
Z [auth e]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
Y [auth b]IPR026532Ribosome biogenesis protein BRX1Family
Y [auth b]IPR007109Brix domainDomain
X [auth 8]IPR029190Ribosomal RNA-processing protein 14/surfeit locus protein 6, C-terminal domainDomain
X [auth 8]IPR029188Ribosomal RNA-processing protein 14, N-terminalDomain
X [auth 8]IPR007019Surfeit locus 6Family
W [auth 7]IPR019002Ribosome biogenesis protein Nop16Family
V [auth Y]IPR005756Large ribosomal subunit protein uL24, eukaryota_archaeaFamily
V [auth Y]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
V [auth Y]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
V [auth Y]IPR005824KOWDomain
V [auth Y]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
V [auth Y]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
U [auth W]IPR024926Nucleolar GTP-binding protein 1Family
U [auth W]IPR031167OBG-type guanine nucleotide-binding (G) domainDomain
U [auth W]IPR012973NOG, C-terminalDomain
U [auth W]IPR010674Nucleolar GTP-binding protein 1, Rossman-fold domainDomain
U [auth W]IPR041623NOG1, N-terminal helical domainDomain
U [auth W]IPR006073GTP binding domainDomain
U [auth W]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
T [auth V]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
T [auth V]IPR000218Large ribosomal subunit protein uL14Family
T [auth V]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
IPR028877Large ribosomal subunit protein eL20Family
IPR023573Large ribosomal subunit protein eL20 domainDomain
IPR021138Large ribosomal subunit protein eL20, eukaryotaFamily
R [auth Q]IPR021131Large ribosomal subunit protein uL15/eL18Domain
R [auth Q]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
R [auth Q]IPR000039Large ribosomal subunit protein eL18Family
R [auth Q]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
Q [auth P]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
Q [auth P]IPR005721Large ribosomal subunit protein uL22, eukaryota/archaeaFamily
Q [auth P]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
Q [auth P]IPR001063Large ribosomal subunit protein uL22Family
P [auth O]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
P [auth O]IPR005822Large ribosomal subunit protein uL13Family
P [auth O]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
P [auth O]IPR005755Large ribosomal subunit protein uL13, eukaryota/archaeaFamily
O [auth N]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
O [auth N]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
O [auth N]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
O [auth N]IPR000439Large ribosomal subunit protein eL15Family
N [auth M]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
N [auth M]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
N [auth M]IPR039660Large ribosomal subunit protein eL14Family
N [auth M]IPR002784Large ribosomal subunit protein eL14 domainDomain
N [auth M]IPR005824KOWDomain
M [auth L]IPR001380Large ribosomal subunit protein eL13Family
M [auth L]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
L [auth K]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
L [auth K]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
K [auth I]IPR044281U3 snoRNP protein/Ribosome production factor 1Family
K [auth I]IPR007109Brix domainDomain
J [auth G]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
J [auth G]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
J [auth G]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
J [auth G]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
J [auth G]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
J [auth G]IPR001921Large ribosomal subunit protein eL8, eukaryotaFamily