VSV Nucleocapsid with Polyamide Bound
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| F [auth E] | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8041903 | 3001763 | SCOP2B (2022-06-29) |
| E [auth D] | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8041903 | 3001763 | SCOP2B (2022-06-29) |
| D [auth C] | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8041903 | 3001763 | SCOP2B (2022-06-29) |
| C [auth B] | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8041903 | 3001763 | SCOP2B (2022-06-29) |
| B [auth A] | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8041903 | 3001763 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| F [auth E] | e6bjyE1 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II | H: Rubredoxin-related | T: Tetrapyrrole methylase C-terminal domain | F: | ECOD (v294.1) | |
| E [auth D] | e6bjyD1 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II | H: Rubredoxin-related | T: Tetrapyrrole methylase C-terminal domain | F: | ECOD (v294.1) | |
| D [auth C] | e6bjyC1 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II | H: Rubredoxin-related | T: Tetrapyrrole methylase C-terminal domain | F: | ECOD (v294.1) | |
| C [auth B] | e6bjyB1 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II | H: Rubredoxin-related | T: Tetrapyrrole methylase C-terminal domain | F: | ECOD (v294.1) | |
| B [auth A] | NMT | e6bjyA1 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II | H: Rubredoxin-related | T: Tetrapyrrole methylase C-terminal domain | F: NMT | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| B [auth A], C [auth B], D [auth C], E [auth D], F [auth E] | PF00945 | Rhabdovirus nucleocapsid protein (Rhabdo_ncap) | Rhabdovirus nucleocapsid protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| A [auth R] | RNA (45-MER) | - | - | - |
| B [auth A], C [auth B], D [auth C], E [auth D], F [auth E] | Nucleoprotein |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| B [auth A], C [auth B], D [auth C], E [auth D], F [auth E] | IPR035961 | Rhabdovirus nucleoprotein-like | Homologous Superfamily |
| B [auth A], C [auth B], D [auth C], E [auth D], F [auth E] | IPR000448 | Rhabdovirus nucleocapsid | Domain |
| B [auth A], C [auth B], D [auth C], E [auth D], F [auth E] | IPR023330 | Rhabdovirus nucleocapsid, N-terminal | Homologous Superfamily |
| B [auth A], C [auth B], D [auth C], E [auth D], F [auth E] | IPR023331 | Rhabdovirus nucleocapsid, C-terminal | Homologous Superfamily |














