6BJH

CIRV p19 mutant T111S in complex with siRNA

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyTombusvirus P19 core protein VP198040824 3001735 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyTombusvirus P19 core protein VP198040824 3001735 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF03220e6bjhA1 A: a+b two layersX: Tombusvirus P19 core protein, VP19 (From Topology)H: Tombusvirus P19 core protein, VP19 (From Topology)T: Tombusvirus P19 core protein, VP19F: PF03220ECOD (1.6)
BPF03220e6bjhB1 A: a+b two layersX: Tombusvirus P19 core protein, VP19 (From Topology)H: Tombusvirus P19 core protein, VP19 (From Topology)T: Tombusvirus P19 core protein, VP19F: PF03220ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.390.180 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (utative)
B3.30.390.180 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF03220Tombusvirus P19 core protein (Tombus_P19)Tombusvirus P19 core protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
RNA silencing suppressor p19 -
RNA (5'-R(P*UP*CP*GP*AP*AP*GP*UP*AP*UP*UP*CP*CP*GP*CP*GP*UP*AP*CP*GP*UP*U)-3')---
RNA (5'-R(P*CP*GP*UP*AP*CP*GP*CP*GP*GP*AP*AP*UP*AP*CP*UP*UP*CP*GP*AP*UP*U)-3')---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR036131Tombusvirus P19 superfamilyHomologous Superfamily
A, B
IPR004905Tombusvirus p19 core proteinFamily