Cryo-EM structure of the dimeric FO region of yeast mitochondrial ATP synthase
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| N [auth d] | e6b2zd01 | A: alpha bundles | X: Rossmann-like | H: P-loop domains-related | T: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | F: | ECOD (develop294) | |
| EA [auth M] | e6b2zM1 | A: alpha bundles | X: Phosphorylase/hydrolase-like | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: | ECOD (develop294) | |
| L [auth a] | ATP-synt_A | e6b2za1 | A: alpha bundles | X: Protein kinase/SAICAR synthase/ATP-grasp | H: beta-propeller | T: 7-bladed | F: ATP-synt_A | ECOD (develop294) |
| A [auth 1] | RRM_1 | e6b2z11 | A: alpha bundles | X: SH3 | H: SH3 | T: SH3 | F: RRM_1 | ECOD (develop294) |
| AA [auth J] | RRM_1 | e6b2zJ1 | A: alpha bundles | X: SH3 | H: SH3 | T: SH3 | F: RRM_1 | ECOD (develop294) |
| B [auth 2] | RRM_1 | e6b2z21 | A: alpha bundles | X: SH3 | H: SH3 | T: SH3 | F: RRM_1 | ECOD (develop294) |
| BA [auth K] | RRM_1 | e6b2zK1 | A: alpha bundles | X: SH3 | H: SH3 | T: SH3 | F: RRM_1 | ECOD (develop294) |
| C [auth 3] | RRM_1 | e6b2z31 | A: alpha bundles | X: SH3 | H: SH3 | T: SH3 | F: RRM_1 | ECOD (develop294) |
| D [auth 4] | RRM_1 | e6b2z41 | A: alpha bundles | X: SH3 | H: SH3 | T: SH3 | F: RRM_1 | ECOD (develop294) |
| E [auth 5] | RRM_1 | e6b2z51 | A: alpha bundles | X: SH3 | H: SH3 | T: SH3 | F: RRM_1 | ECOD (develop294) |
| F [auth 6] | RRM_1 | e6b2z61 | A: alpha bundles | X: SH3 | H: SH3 | T: SH3 | F: RRM_1 | ECOD (develop294) |
| H [auth 8] | RRM_1 | e6b2z81 | A: alpha bundles | X: SH3 | H: SH3 | T: SH3 | F: RRM_1 | ECOD (develop294) |
| I [auth 9] | RRM_1 | e6b2z91 | A: alpha bundles | X: SH3 | H: SH3 | T: SH3 | F: RRM_1 | ECOD (develop294) |
| J [auth 0] | RRM_1 | e6b2z01 | A: alpha bundles | X: SH3 | H: SH3 | T: SH3 | F: RRM_1 | ECOD (develop294) |
| T [auth C] | RRM_1 | e6b2zC1 | A: alpha bundles | X: SH3 | H: SH3 | T: SH3 | F: RRM_1 | ECOD (develop294) |
| U [auth D] | RRM_1 | e6b2zD1 | A: alpha bundles | X: SH3 | H: SH3 | T: SH3 | F: RRM_1 | ECOD (develop294) |
| V [auth E] | RRM_1 | e6b2zE1 | A: alpha bundles | X: SH3 | H: SH3 | T: SH3 | F: RRM_1 | ECOD (develop294) |
| W [auth F] | RRM_1 | e6b2zF1 | A: alpha bundles | X: SH3 | H: SH3 | T: SH3 | F: RRM_1 | ECOD (develop294) |
| X [auth G] | RRM_1 | e6b2zG1 | A: alpha bundles | X: SH3 | H: SH3 | T: SH3 | F: RRM_1 | ECOD (develop294) |
| Y [auth H] | RRM_1 | e6b2zH1 | A: alpha bundles | X: SH3 | H: SH3 | T: SH3 | F: RRM_1 | ECOD (develop294) |
| Z [auth I] | RRM_1 | e6b2zI1 | A: alpha bundles | X: SH3 | H: SH3 | T: SH3 | F: RRM_1 | ECOD (develop294) |
| G [auth 7] | RRM_1 | e6b2z71 | A: alpha bundles | X: SH3 | H: SH3 | T: SH3 | F: RRM_1 | ECOD (develop294) |
| CA [auth B] | RRM_1 | e6b2zB1 | A: alpha bundles | X: SH3 | H: SH3 | T: SH3 | F: RRM_1 | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Transmembrane | Alpha-helical polytopic | Proton or Sodium translocating F-type, V-type and A-type ATPases | V-type and F-type ATPases |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
| Chains | Resource Link | Group | Subgroup | Protein |
|---|---|---|---|---|
| mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | F-type ATPase | dimeric FO of ATP synthase |














