6B2Z
Cryo-EM structure of the dimeric FO region of yeast mitochondrial ATP synthase
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
AA [auth J] | PF00137 | e6b2zJ1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
B [auth 2] | PF00137 | e6b2z21 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
BA [auth K] | PF00137 | e6b2zK1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
C [auth 3] | PF00137 | e6b2z31 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
CA [auth B] | PF00137 | e6b2zB1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
D [auth 4] | PF00137 | e6b2z41 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
E [auth 5] | PF00137 | e6b2z51 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
G [auth 7] | PF00137 | e6b2z71 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
I [auth 9] | PF00137 | e6b2z91 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
T [auth C] | PF00137 | e6b2zC1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
V [auth E] | PF00137 | e6b2zE1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
W [auth F] | PF00137 | e6b2zF1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
Y [auth H] | PF00137 | e6b2zH1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
Z [auth I] | PF00137 | e6b2zI1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
A [auth 1] | PF00137 | e6b2z11 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
F [auth 6] | PF00137 | e6b2z61 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
H [auth 8] | PF00137 | e6b2z81 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
J [auth 0] | PF00137 | e6b2z01 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
U [auth D] | PF00137 | e6b2zD1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
X [auth G] | PF00137 | e6b2zG1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
L [auth a] | PF00119 | e6b2za1 | A: alpha bundles | X: F1F0 ATP synthase subunit A (From Topology) | H: F1F0 ATP synthase subunit A (From Topology) | T: F1F0 ATP synthase subunit A | F: PF00119 | ECOD (1.6) |
EA [auth M] | PF00119 | e6b2zM1 | A: alpha bundles | X: F1F0 ATP synthase subunit A (From Topology) | H: F1F0 ATP synthase subunit A (From Topology) | T: F1F0 ATP synthase subunit A | F: PF00119 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00137 | ATP synthase subunit C (ATP-synt_C) | ATP synthase subunit C | - | Family | |
LA [auth T], S [auth k] | PF11022 | ATP synthase subunit K (ATP19) | ATP synthase subunit K | - | Family |
DA [auth L], K [auth A] | PF05933 | Fungal ATP synthase protein 8 (A6L) (Fun_ATP-synt_8) | Fungal ATP synthase protein 8 (A6L) | - | Family |
EA [auth M], L [auth a] | PF00119 | ATP synthase A chain (ATP-synt_A) | ATP synthase A chain | - | Domain |
FA [auth N], M [auth b] | PF05405 | Mitochondrial ATP synthase B chain precursor (ATP-synt_B) (Mt_ATP-synt_B) | Mitochondrial ATP synthase B chain precursor (ATP-synt_B) | - | Family |
GA [auth O], N [auth d] | PF05873 | ATP synthase D chain, mitochondrial (ATP5H) (Mt_ATP-synt_D) | ATP synthase D chain, mitochondrial (ATP5H) | - | Family |
IA [auth Q], P [auth f] | PF10791 | Mitochondrial F1-F0 ATP synthase subunit F of fungi (F1F0-ATPsyn_F) | Mitochondrial F1-F0 ATP synthase subunit F of fungi | - | Family |
KA [auth S], R [auth i] | PF04911 | ATP synthase j chain (ATP-synt_J) | ATP synthase j chain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Proton or Sodium translocating F-type, V-type and A-type ATPases | V-type and F-type ATPases |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | F-type ATPase | dimeric FO of ATP synthase |