Annotations: 6B0B

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	APOBEC domain-like	8079978	4005403	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Cytidine deaminase-like	8087262	3001838	SCOP2 (2022-06-29)
E	SCOP2B Superfamily	Cytidine deaminase-like	8087262	3001838	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	GFP-like	8081043	3000576	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	GFP-like	8081043	3000576	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	APOBEC_N	e6b0bA1	A: a+b three layers	X: Cytidine deaminase-like (From Topology)	H: Cytidine deaminase-like (From Topology)	T: Cytidine deaminase-like	F: APOBEC_N	ECOD (1.6)
E	APOBEC_N	e6b0bE1	A: a+b three layers	X: Cytidine deaminase-like (From Topology)	H: Cytidine deaminase-like (From Topology)	T: Cytidine deaminase-like	F: APOBEC_N	ECOD (1.6)
D	GFP	e6b0bD1	A: beta barrels	X: GFP-like (From Topology)	H: GFP-like (From Topology)	T: GFP-like	F: GFP	ECOD (1.6)
H	GFP	e6b0bH1	A: beta barrels	X: GFP-like (From Topology)	H: GFP-like (From Topology)	T: GFP-like	F: GFP	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, E	PF18771	APOBEC3 (APOBEC3)	APOBEC3	-	Family
D, H	PF01353	Green fluorescent protein (GFP)	Green fluorescent protein	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, E	APOBEC3H	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines deoxycytidine deaminase activity hydrolase activity catalytic activity deaminase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds cytidine deaminase activity cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines deoxycytidine deaminase activity hydrolase activity catalytic activity deaminase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds cytidine deaminase activity cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding RNA binding organic cyclic compound binding nucleic acid binding	DNA cytosine deamination primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process DNA deamination DNA modification organic substance metabolic process macromolecule modification metabolic process macromolecule metabolic process negative regulation by host of viral genome replication biological process involved in interspecies interaction between organisms DNA cytosine deamination primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process DNA deamination DNA modification organic substance metabolic process macromolecule modification metabolic process macromolecule metabolic process negative regulation by host of viral genome replication biological process involved in interspecies interaction between organisms modulation by host of symbiont process viral life cycle negative regulation by host of viral process modulation by host of viral genome replication biological process involved in symbiotic interaction modulation by host of viral process viral genome replication viral process biological process involved in interaction with symbiont regulation of biological process regulation of cellular process negative regulation of cellular process biological regulation negative regulation of biological process cellular process retrotransposon silencing transposition retrotransposition cytidine to uridine editing RNA metabolic process RNA modification base conversion or substitution editing DNA demethylation DNA dealkylation demethylation response to stimulus immune response response to other organism defense response defense response to symbiont response to external stimulus response to biotic stimulus immune system process defense response to other organism response to stress innate immune response response to external biotic stimulus negative regulation of cellular metabolic process negative regulation of RNA biosynthetic process regulation of primary metabolic process regulation of RNA metabolic process organic substance biosynthetic process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process cellular metabolic process negative regulation of metabolic process regulation of cellular metabolic process single stranded viral RNA replication via double stranded DNA intermediate negative regulation of cellular biosynthetic process biosynthetic process negative regulation of macromolecule biosynthetic process organic cyclic compound biosynthetic process regulation of macromolecule biosynthetic process regulation of metabolic process negative regulation of RNA metabolic process regulation of single stranded viral RNA replication via double stranded DNA intermediate cellular biosynthetic process negative regulation of single stranded viral RNA replication via double stranded DNA intermediate RNA biosynthetic process nucleic acid biosynthetic process negative regulation of viral process viral RNA genome replication regulation of RNA biosynthetic process negative regulation of macromolecule metabolic process regulation of biosynthetic process negative regulation of viral genome replication regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process macromolecule biosynthetic process regulation of cellular biosynthetic process regulation of viral process regulation of viral life cycle negative regulation of biosynthetic process regulation of viral genome replication defense response to virus response to virus clearance of foreign intracellular DNA clearance of foreign intracellular nucleic acids	intracellular anatomical structure cytoplasm cellular anatomical entity cytosol cytoplasmic ribonucleoprotein granule ribonucleoprotein granule intracellular organelle organelle intracellular non-membrane-bounded organelle supramolecular complex P-body non-membrane-bounded organelle membrane-bounded organelle nucleus intracellular anatomical structure cytoplasm cellular anatomical entity cytosol cytoplasmic ribonucleoprotein granule ribonucleoprotein granule intracellular organelle organelle intracellular non-membrane-bounded organelle supramolecular complex P-body non-membrane-bounded organelle membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen
B, F	RNA (5'-R(UPAPAPAPAPAPAPA)-3')	-	-	-
C, G	RNA (5'-R(UPUPUPUPUPUPUPU)-3')	-	-	-
D, H	MCherry	-	bioluminescence cellular metabolic process metabolic process cellular process generation of precursor metabolites and energy	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, E	IPR041512	APOBEC3H	Family
A, E	IPR016193	Cytidine deaminase-like	Homologous Superfamily
A, E	IPR002125	Cytidine and deoxycytidylate deaminase domain	Domain
A, E	IPR016192	APOBEC/CMP deaminase, zinc-binding	Binding Site
D, H	IPR000786	Green fluorescent protein, GFP	Family
D, H	IPR011584	Green fluorescent protein-related	Family
D, H	IPR009017	Green fluorescent protein	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, E	Pharos: Q6NTF7	plasma cell myeloma

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.