6B08 | pdb_00006b08

Crystal structure of Pfs25 in complex with the transmission blocking antibody 1276


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth A]EGF_CAe6b08A3 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: EGF_CAECOD (1.6)
C [auth A]Plasmod_Pvs28e6b08A1 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: Plasmod_Pvs28ECOD (1.6)
C [auth A]UNK_F_TYPEe6b08A2 A: few secondary structure elementsX: EGF-likeH: Fibulin-4 EGF-like 1 domain (From Topology)T: Fibulin-4 EGF-like 1 domainF: UNK_F_TYPEECOD (1.6)
BC1-sete6b08B2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-setECOD (1.6)
BV-set_3e6b08B1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_3ECOD (1.6)
A [auth C]C1-set_1e6b08C1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_1ECOD (1.6)
A [auth C]V-set_10e6b08C2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_10ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C [auth A]2.90.20.10 Mainly Beta Orthogonal Prism Plasmodium vivax P25 fold Plasmodium vivax P25 domainCATH (utative)
B2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
A [auth C]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
Fab 1276 L-LAMBDA Homo sapiens (human) IGLV3-21*01, IGLJ3*02, IGLC2*01, IGLC2*02, IGLC3*04 V-DOMAIN V-LAMBDA, C-DOMAIN C-LAMBDA IG FAB-GAMMA-1_LAMBDA IMGT (202601-0)
A [auth C]Fab 1276 VH-CH1 Homo sapiens (human) IGHV1-2*04, IGHJ4*01, IGHJ4*02, IGHJ4*03, IGHG1*01, IGHG1*02, IGHG1*04, IGHG1*05 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-1_LAMBDA IMGT (202601-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
Light ChainIGLV3 Lambdapfs25SAbDab (2026-01-16)
A [auth C]Heavy ChainIGHV1 -pfs25SAbDab (2026-01-16)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth A]Pfs25- -
1276 antibody, light chain---
A [auth C]1276 antibody, heavy chain---

InterPro: Protein Family Classification InterPro Database Homepage