6AIT | pdb_00006ait

Crystal structure of E. coli BepA


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
FOxidored_q2e6aitF1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Oxidored_q2ECOD (v294.1)
EOxidored_q2e6aitE1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Oxidored_q2ECOD (v294.1)
DOxidored_q2e6aitD1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Oxidored_q2ECOD (v294.1)
COxidored_q2e6aitC1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Oxidored_q2ECOD (v294.1)
BLipocalin_7e6aitB1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Lipocalin_7ECOD (v294.1)
AOxidored_q2e6aitA1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Oxidored_q2ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF14559Tetratricopeptide repeat (TPR_19)Tetratricopeptide repeat- Repeat
A, B, C, D, E
PF01435Peptidase family M48 (Peptidase_M48)Peptidase family M48Peptidase_M48 is the largely extracellular catalytic region of CAAX prenyl protease homologues such as Human FACE-1 protease. These are metallopeptidases, with the characteristic HExxH motif giving the two histidine-zinc-ligands and an adjacent gluta ...Peptidase_M48 is the largely extracellular catalytic region of CAAX prenyl protease homologues such as Human FACE-1 protease. These are metallopeptidases, with the characteristic HExxH motif giving the two histidine-zinc-ligands and an adjacent glutamate on the next helix being the third. The whole molecule folds to form a deep groove/cleft into which the substrate can fit [1,2].
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR001915Peptidase M48Domain
A, B, C, D, E
IPR051156Mitochondrial and Outer Membrane MetalloproteaseFamily
A, B, C, D, E
IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR030873Beta-barrel assembly-enhancing proteaseFamily