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 6AFP | pdb_00006afp

Crystal structure of class A b-lactamase, PenL, variant Asn136Asp, from Burkholderia thailandensis, in complex with ceftazidime-like boronic acid

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B Superfamilybeta-lactamase/transpeptidase-like 8069779 3001604 SCOP2B (2022-06-29)
BSCOP2B Superfamilybeta-lactamase/transpeptidase-like 8069779 3001604 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AHistonee6afpA1 A: alpha arraysX: Nat/IvyH: Acyl-CoA N-acyltransferases (Nat)T: Acyl-CoA N-acyltransferases (Nat)F: HistoneECOD (v295.2)
BHistonee6afpB1 A: alpha arraysX: Nat/IvyH: Acyl-CoA N-acyltransferases (Nat)T: Acyl-CoA N-acyltransferases (Nat)F: HistoneECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.40.710.10 Alpha Beta 3-Layer(aba) Sandwich Beta-lactamase DD-peptidase/beta-lactamase superfamilyCATH (utative)
B3.40.710.10 Alpha Beta 3-Layer(aba) Sandwich Beta-lactamase DD-peptidase/beta-lactamase superfamilyCATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Beta-lactamase -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR045155Beta-lactamase class A, catalytic domainDomain
A, B
IPR012338Beta-lactamase/transpeptidase-likeHomologous Superfamily
A, B
IPR000871Beta-lactamase, class-AFamily
A, B
IPR023650Beta-lactamase, class-A active siteActive Site