6A8J | pdb_00006a8j

Crystal structure of bacterial protein toxins

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	MLD	e6a8jD2	A: alpha bundles	X: Bromodomain-like	H: PMT helical bundle domain-like	T: PMT helical bundle domain-like	F: MLD	ECOD (1.6)
D	UNK_F_TYPE	e6a8jD3	A: alpha complex topology	X: PMT central region-like (From Topology)	H: PMT central region-like (From Topology)	T: PMT central region-like	F: UNK_F_TYPE	ECOD (1.6)
D	EUF08646	e6a8jD1	A: a/b three-layered sandwiches	X: EreA/ChaN-like (From Topology)	H: EreA/ChaN-like (From Topology)	T: EreA/ChaN-like	F: EUF08646	ECOD (1.6)
C	MLD	e6a8jC1	A: alpha bundles	X: Bromodomain-like	H: PMT helical bundle domain-like	T: PMT helical bundle domain-like	F: MLD	ECOD (1.6)
C	UNK_F_TYPE	e6a8jC2	A: alpha complex topology	X: PMT central region-like (From Topology)	H: PMT central region-like (From Topology)	T: PMT central region-like	F: UNK_F_TYPE	ECOD (1.6)
C	EUF08646	e6a8jC3	A: a/b three-layered sandwiches	X: EreA/ChaN-like (From Topology)	H: EreA/ChaN-like (From Topology)	T: EreA/ChaN-like	F: EUF08646	ECOD (1.6)
B	MLD	e6a8jB3	A: alpha bundles	X: Bromodomain-like	H: PMT helical bundle domain-like	T: PMT helical bundle domain-like	F: MLD	ECOD (1.6)
B	UNK_F_TYPE	e6a8jB2	A: alpha complex topology	X: PMT central region-like (From Topology)	H: PMT central region-like (From Topology)	T: PMT central region-like	F: UNK_F_TYPE	ECOD (1.6)
B	EUF08646	e6a8jB1	A: a/b three-layered sandwiches	X: EreA/ChaN-like (From Topology)	H: EreA/ChaN-like (From Topology)	T: EreA/ChaN-like	F: EUF08646	ECOD (1.6)
A	MLD	e6a8jA1	A: alpha bundles	X: Bromodomain-like	H: PMT helical bundle domain-like	T: PMT helical bundle domain-like	F: MLD	ECOD (1.6)
A	UNK_F_TYPE	e6a8jA3	A: alpha complex topology	X: PMT central region-like (From Topology)	H: PMT central region-like (From Topology)	T: PMT central region-like	F: UNK_F_TYPE	ECOD (1.6)
A	EUF08646	e6a8jA2	A: a/b three-layered sandwiches	X: EreA/ChaN-like (From Topology)	H: EreA/ChaN-like (From Topology)	T: EreA/ChaN-like	F: EUF08646	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	1.20.140.180	Mainly Alpha	Up-down Bundle	Butyryl-CoA Dehydrogenase, subunit A	domain 3	CATH (utative)
D	3.40.50.11550	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold		CATH (utative)
C	1.20.140.180	Mainly Alpha	Up-down Bundle	Butyryl-CoA Dehydrogenase, subunit A	domain 3	CATH (utative)
C	3.40.50.11550	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold		CATH (utative)
B	1.20.140.180	Mainly Alpha	Up-down Bundle	Butyryl-CoA Dehydrogenase, subunit A	domain 3	CATH (utative)
B	3.40.50.11550	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold		CATH (utative)
A	1.20.140.180	Mainly Alpha	Up-down Bundle	Butyryl-CoA Dehydrogenase, subunit A	domain 3	CATH (utative)
A	3.40.50.11550	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold		CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	RTX toxin	toxin activity	-	host cellular component cellular anatomical structure host cell part host cell membrane other organism part extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR048461	Dermonecrotic toxin-like, C2 domain	Domain
A, B, C, D	IPR020972	Dermonecrotic/RTX toxin, membrane localization domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.