5ZVX

Crystal structure of K86A mutant of phosphomannose isomerase from Salmonella typhimurium

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PMI_typeI_N	e5zvxA3	A: beta sandwiches	X: jelly-roll	H: Double-stranded beta-helix (From Topology)	T: Double-stranded beta-helix	F: PMI_typeI_N	ECOD (1.6)
A	Cupin_2_2	e5zvxA1	A: beta sandwiches	X: jelly-roll	H: Double-stranded beta-helix (From Topology)	T: Double-stranded beta-helix	F: Cupin_2_2	ECOD (1.6)
A	PMI_typeI_N_1	e5zvxA2	A: alpha arrays	X: Phosphomannose isomerase helical insertion domain (From Topology)	H: Phosphomannose isomerase helical insertion domain (From Topology)	T: Phosphomannose isomerase helical insertion domain	F: PMI_typeI_N_1	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.120.10	Mainly Beta	Sandwich	Jelly Rolls	Jelly Rolls	CATH (utative)
A	1.10.441.10	Mainly Alpha	Orthogonal Bundle	Phosphomannose Isomerase	domain 2	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF21621	Mannose-6-phosphate isomerase, cupin domain (MPI_cupin_dom)	Mannose-6-phosphate isomerase, cupin domain	This domain is found in Mannose-6-phosphate isomerase from Archaeoglobus fulgidus (MPI) and similar bacterial sequences. This enzyme catalyses the interconversion of mannose 6-phosphate and fructose 6-phosphate [1,2]. This entry represents the C-term ...	This domain is found in Mannose-6-phosphate isomerase from Archaeoglobus fulgidus (MPI) and similar bacterial sequences. This enzyme catalyses the interconversion of mannose 6-phosphate and fructose 6-phosphate [1,2]. This entry represents the C-terminal domain, which is found associated with PFam:PF20511. This domain shows an all-beta structure.	Domain
A	PF20511	Phosphomannose isomerase type I, catalytic domain (PMI_typeI_cat)	Phosphomannose isomerase type I, catalytic domain	This entry represents the catalytic domain of Phosphomannose isomerase type I enzymes (EC 5.3.1.8) which contains a zinc-binding site. It is composed of beta-strands connected by long loops in a jelly roll conformation [1].	Domain
A	PF20512	Phosphomannose isomerase type I, helical insertion domain (PMI_typeI_hel)	Phosphomannose isomerase type I, helical insertion domain	This entry represents the alpha-helical insertion domain of Phosphomannose isomerase type I enzymes (EC 5.3.1.8), in which the helices are packed closely, connected by short turns and loops. This domain packs closely against the catalytic domain, int ...	This entry represents the alpha-helical insertion domain of Phosphomannose isomerase type I enzymes (EC 5.3.1.8), in which the helices are packed closely, connected by short turns and loops. This domain packs closely against the catalytic domain, interrupting it [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Mannose-6-phosphate isomerase	isomerase activity intramolecular oxidoreductase activity, interconverting aldoses and ketoses intramolecular oxidoreductase activity mannose-6-phosphate isomerase activity catalytic activity cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding	carbohydrate metabolic process organic substance metabolic process primary metabolic process metabolic process carbohydrate derivative biosynthetic process nucleotide-sugar metabolic process carbohydrate derivative metabolic process nucleobase-containing compound biosynthetic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process biosynthetic process nucleobase-containing small molecule metabolic process organic cyclic compound biosynthetic process organic substance biosynthetic process carbohydrate metabolic process organic substance metabolic process primary metabolic process metabolic process carbohydrate derivative biosynthetic process nucleotide-sugar metabolic process carbohydrate derivative metabolic process nucleobase-containing compound biosynthetic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process biosynthetic process nucleobase-containing small molecule metabolic process organic cyclic compound biosynthetic process organic substance biosynthetic process GDP-mannose biosynthetic process small molecule metabolic process nucleotide-sugar biosynthetic process GDP-mannose metabolic process	intracellular anatomical structure cytoplasm cellular anatomical entity cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR018050	Phosphomannose isomerase, type I, conserved site	Conserved Site
A	IPR049071	Mannose-6-phosphate isomerase, cupin domain	Domain
A	IPR046457	Phosphomannose isomerase type I, catalytic domain	Domain
A	IPR014710	RmlC-like jelly roll fold	Homologous Superfamily
A	IPR001250	Mannose-6-phosphate isomerase, type I	Family
A	IPR016305	Mannose-6-phosphate isomerase	Family
A	IPR011051	RmlC-like cupin domain superfamily	Homologous Superfamily
A	IPR046458	Phosphomannose isomerase type I, helical insertion domain	Domain

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.