5ZIQ | pdb_00005ziq

Crystal structure of hexacoordinated heme protein from anhydrobiotic tardigrade at pH 4

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d5ziqd_	All alpha proteins	Globin-like	Globin-like	automated matches	automated matches	Water bear (Ramazzottius varieornatus ) [TaxId: 947166 ],	SCOPe (2.08)
C	d5ziqc1	All alpha proteins	Globin-like	Globin-like	automated matches	automated matches	Water bear (Ramazzottius varieornatus ) [TaxId: 947166 ],	SCOPe (2.08)
C	d5ziqc2	Artifacts	Tags	Tags	Tags	N-terminal Tags	Water bear (Ramazzottius varieornatus ) [TaxId: 947166 ],	SCOPe (2.08)
B	d5ziqb1	All alpha proteins	Globin-like	Globin-like	automated matches	automated matches	Water bear (Ramazzottius varieornatus ) [TaxId: 947166 ],	SCOPe (2.08)
B	d5ziqb2	Artifacts	Tags	Tags	Tags	N-terminal Tags	Water bear (Ramazzottius varieornatus ) [TaxId: 947166 ],	SCOPe (2.08)
A	d5ziqa1	All alpha proteins	Globin-like	Globin-like	automated matches	automated matches	Water bear (Ramazzottius varieornatus ) [TaxId: 947166 ],	SCOPe (2.08)
A	d5ziqa2	Artifacts	Tags	Tags	Tags	N-terminal Tags	Water bear (Ramazzottius varieornatus ) [TaxId: 947166 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2 Family	Globins	8070486	4000551	SCOP2 (2022-06-29)
D	SCOP2 Superfamily	Globin-like	8070487	3000554	SCOP2 (2022-06-29)
C	SCOP2B Superfamily	Globin-like	8070487	3000554	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Globin-like	8070487	3000554	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Globin-like	8070487	3000554	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	Mannosidase_ig	e5ziqD1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Mannosidase_ig	ECOD (v294.1)
C	Mannosidase_ig	e5ziqC1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Mannosidase_ig	ECOD (v294.1)
B	Mannosidase_ig	e5ziqB1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Mannosidase_ig	ECOD (v294.1)
A	Cytochrom_B562	e5ziqA1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Cytochrom_B562	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF00042	Globin (Globin)	Globin		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Globin protein	oxygen binding binding small molecule binding oxygen carrier activity molecular carrier activity tetrapyrrole binding heme binding cation binding ion binding metal ion binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR009050	Globin-like superfamily	Homologous Superfamily
A, B, C, D	IPR000971	Globin	Domain
A, B, C, D	IPR012292	Globin/Protoglobin	Homologous Superfamily
A, B, C, D	IPR050532	Globin-like Oxygen Transporters	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.