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 5Z49 | pdb_00005z49

Crystal structure of the effector-binding domain of Synechococcus elongatus CmpR in complex with ribulose-1,5-bisphosphate

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth A]Collar,S_tail_recep_bde5z49A1 A: alpha arraysX: L-aspartase middle domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: Collar,S_tail_recep_bdECOD (v295.2)
A [auth B]PINe5z49B1 A: alpha arraysX: fingers domain in bacteriophage RB69-like DNA polymerase IH: fingers domain in bacteriophage RB69-like DNA polymerase IT: fingers domain in bacteriophage RB69-like DNA polymerase IF: PINECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth B],
B [auth A]		PF03466LysR substrate binding domain (LysR_substrate)LysR substrate binding domain- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth B],
B [auth A]		HTH-type transcriptional activator CmpR -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth B],
B [auth A]		IPR005119LysR, substrate-bindingDomain
A [auth B],
B [auth A]		IPR000847LysR, HTH, N-terminal domainDomain
A [auth B],
B [auth A]		IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
A [auth B],
B [auth A]		IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily