Crystal structure of beta-1,2-glucooligosaccharide binding protein in complex with sophorotriose
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d5ysda1 | Alpha and beta proteins (a/b) | Periplasmic binding protein-like II | Periplasmic binding protein-like II | automated matches | automated matches | (Listeria innocua Clip11262 ) [TaxId: 272626 ], | SCOPe (2.08) |
| A | d5ysda2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Listeria innocua Clip11262 ) [TaxId: 272626 ], | SCOPe (2.08) |
| B | d5ysdb1 | Alpha and beta proteins (a/b) | Periplasmic binding protein-like II | Periplasmic binding protein-like II | automated matches | automated matches | (Listeria innocua Clip11262 ) [TaxId: 272626 ], | SCOPe (2.08) |
| B | d5ysdb2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Listeria innocua Clip11262 ) [TaxId: 272626 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | OCD_Mu_crystall | e5ysdA1 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Peptidyl-tRNA hydrolase-like | T: Peptidyl-tRNA hydrolase-like | F: OCD_Mu_crystall | ECOD (v294.1) |
| B | TBP | e5ysdB1 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Ribosomal protein S5 domain 2-like | T: Ribosomal protein S5 domain 2-like | F: TBP | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.40.190.10 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
| B | 3.40.190.10 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR006059 | Bacterial-type extracellular solute-binding protein | Family |














