Annotations: 5YET

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B		e5yetB1	A: alpha arrays	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F:	ECOD (v295.2)
A		e5yetA1	A: alpha arrays	X: P-loop domains-like	H: beta-propeller	T: 7-bladed	F:	ECOD (v295.2)

Chains	Accession	Name	Description	Comments	Source
A, B	PF09588	YqaJ-like viral recombinase domain (YqaJ)	YqaJ-like viral recombinase domain	This protein family is found in many different bacterial species but is of viral origin. The protein forms an oligomer and functions as a processive alkaline exonuclease that digests linear double-stranded DNA in a Mg(2+)-dependent reaction, It has a ...	This protein family is found in many different bacterial species but is of viral origin. The protein forms an oligomer and functions as a processive alkaline exonuclease that digests linear double-stranded DNA in a Mg(2+)-dependent reaction, It has a preference for 5'-phosphorylated DNA ends. It thus forms part of the two-component SynExo viral recombinase functional unit [1].	Domain

Chains	Accession	Name	Type
A, B	IPR019080	YqaJ viral recombinase	Domain
A, B	IPR011604	PD-(D/E)XK endonuclease-like domain superfamily	Homologous Superfamily
A, B	IPR011335	Restriction endonuclease type II-like	Homologous Superfamily
A, B	IPR051703	NF-kappa-B Signaling Regulator	Family
A, B	IPR017482	Lambda-type exonuclease	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

5YET | pdb_00005yet