5YBL | pdb_00005ybl

Fe(II)/(alpha)ketoglutarate-dependent dioxygenase AusE

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AATP-synt_VA_Ce5yblA1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_VA_CECOD (v294.1)
BPkinasee5yblB1 A: a/b three-layered sandwichesX: Protein kinase/SAICAR synthase/ATP-graspH: Protein kinase/SAICAR synthase/ATP-graspT: Protein kinaseF: PkinaseECOD (v294.1)
CATP-synt_VA_Ce5yblC1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_VA_CECOD (v294.1)
DATP-synt_VA_Ce5yblD1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_VA_CECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.120.620 Mainly Beta Sandwich Jelly Rolls q2cbj1_9rhob like domainCATH (utative)
B2.60.120.620 Mainly Beta Sandwich Jelly Rolls q2cbj1_9rhob like domainCATH (utative)
C2.60.120.620 Mainly Beta Sandwich Jelly Rolls q2cbj1_9rhob like domainCATH (utative)
D2.60.120.620 Mainly Beta Sandwich Jelly Rolls q2cbj1_9rhob like domainCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF05721Phytanoyl-CoA dioxygenase (PhyH) (PhyH)Phytanoyl-CoA dioxygenase (PhyH)This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins, ectoine hydroxylases and a number of bacterial deoxygenases. PhyH is a peroxisomal enzyme catalysing the first step of phytanic acid alpha-oxidation. PhyH deficie ...This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins, ectoine hydroxylases and a number of bacterial deoxygenases. PhyH is a peroxisomal enzyme catalysing the first step of phytanic acid alpha-oxidation. PhyH deficiency causes Refsum's disease (RD) which is an inherited neurological syndrome biochemically characterised by the accumulation of phytanic acid in plasma and tissues [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Multifunctional dioxygenase ausE -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR008775Phytanoyl-CoA dioxygenase-likeFamily