5Y9N | pdb_00005y9n

Crystal structure of Pyrococcus furiosus PbaA (monoclinic form), an archaeal homolog of proteasome-assembly chaperone

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Peptidase_M1	e5y9nA1	A: a/b three-layered sandwiches	X: Protein kinase/SAICAR synthase/ATP-grasp	H: Protein kinase/SAICAR synthase/ATP-grasp	T: Protein kinase	F: Peptidase_M1	ECOD (v294.1)
B	ATP-synt_VA_C	e5y9nB1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: ATP-synt_VA_C	ECOD (v294.1)
C	ATP-synt_VA_C	e5y9nC1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: ATP-synt_VA_C	ECOD (v294.1)
D	ATP-synt_VA_C	e5y9nD1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: ATP-synt_VA_C	ECOD (v294.1)
E	ATP-synt_VA_C	e5y9nE1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: ATP-synt_VA_C	ECOD (v294.1)
F	ATP-synt_VA_C	e5y9nF1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: ATP-synt_VA_C	ECOD (v294.1)
G	ATP-synt_VA_C	e5y9nG1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: ATP-synt_VA_C	ECOD (v294.1)
H	ATP-synt_VA_C	e5y9nH1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: ATP-synt_VA_C	ECOD (v294.1)
I	ATP-synt_VA_C	e5y9nI1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: ATP-synt_VA_C	ECOD (v294.1)
J	ATP-synt_VA_C	e5y9nJ1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: ATP-synt_VA_C	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.50.10900	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	PAC-like subunit	CATH (utative)
B	3.40.50.10900	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	PAC-like subunit	CATH (utative)
C	3.40.50.10900	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	PAC-like subunit	CATH (utative)
D	3.40.50.10900	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	PAC-like subunit	CATH (utative)
E	3.40.50.10900	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	PAC-like subunit	CATH (utative)
F	3.40.50.10900	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	PAC-like subunit	CATH (utative)
G	3.40.50.10900	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	PAC-like subunit	CATH (utative)
H	3.40.50.10900	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	PAC-like subunit	CATH (utative)
I	3.40.50.10900	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	PAC-like subunit	CATH (utative)
J	3.40.50.10900	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	PAC-like subunit	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	PF09754	PAC2 family (PAC2)	PAC2 family	-	Family

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR004425	Proteasome assembly chaperone MJ0106-like	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR019151	Proteasome assembly chaperone 2	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR038389	Proteasome assembly chaperone 2 superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.