Crystal structure of Lachnospiraceae bacterium ND2006 Cpf1 in complex with crRNA and target DNA (TTTA PAM)
External Resource: Annotation
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|
| A | cas_Cpf1_4th | e5xusA3 | A: beta barrels | X: OB-fold | H: Small protein B (SmpB) (From Topology) | T: Small protein B (SmpB) | F: cas_Cpf1_4th | ECOD (1.6) |
| A | cas_Cpf1_3rd | e5xusA1 | A: alpha arrays | X: CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain (From Topology) | H: CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain (From Topology) | T: CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain | F: cas_Cpf1_3rd | ECOD (1.6) |
| A | cas_Cpf1_1st | e5xusA5 | A: alpha complex topology | X: CRISPR-associated endonuclease first helical domain | H: CRISPR-associated endonuclease Cpf1 first helical domain (From Topology) | T: CRISPR-associated endonuclease Cpf1 first helical domain | F: cas_Cpf1_1st | ECOD (1.6) |
| A | cas_Cpf1_2nd | e5xusA2 | A: alpha complex topology | X: CRISPR-associated endonuclease Cpf1 second helical domain (From Topology) | H: CRISPR-associated endonuclease Cpf1 second helical domain (From Topology) | T: CRISPR-associated endonuclease Cpf1 second helical domain | F: cas_Cpf1_2nd | ECOD (1.6) |
| A | cas_Cpf1_5th | e5xusA6 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: cas_Cpf1_5th | ECOD (1.6) |
| A | cas_Cpf1_6th | e5xusA4 | A: few secondary structure elements | X: CRISPR-associated endonuclease Cpf1 nuclease domain (From Topology) | H: CRISPR-associated endonuclease Cpf1 nuclease domain (From Topology) | T: CRISPR-associated endonuclease Cpf1 nuclease domain | F: cas_Cpf1_6th | ECOD (1.6) |
