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 5XIF | pdb_00005xif

Crystal Structure of Prolyl-tRNA Synthetase (PRS) from Toxoplasma gondii

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BIg_2e5xifB1 A: alpha arraysX: FAD-linked reductases, C-terminal domain-likeH: FAD-linked reductases-CT: FAD-linked reductases-CF: Ig_2ECOD (v295.2)
AIg_2e5xifA1 A: alpha arraysX: FAD-linked reductases, C-terminal domain-likeH: FAD-linked reductases-CT: FAD-linked reductases-CF: Ig_2ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.30.930.10 Alpha Beta 2-Layer Sandwich BirA Bifunctional Protein domain 2CATH (utative)
B3.40.50.800 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Anticodon-binding domainCATH (utative)
B3.30.110.30 Alpha Beta 2-Layer Sandwich Translation Initiation Factor IF3 C-terminal domain of ProRSCATH (utative)
A3.30.930.10 Alpha Beta 2-Layer Sandwich BirA Bifunctional Protein domain 2CATH (utative)
A3.40.50.800 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Anticodon-binding domainCATH (utative)
A3.30.110.30 Alpha Beta 2-Layer Sandwich Translation Initiation Factor IF3 C-terminal domain of ProRSCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF03129Anticodon binding domain (HGTP_anticodon)Anticodon binding domainThis domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [1] it is probably the anticodon binding domain [2]. Domain
A, B
PF00587tRNA synthetase class II core domain (G, H, P, S and T) (tRNA-synt_2b)tRNA synthetase class II core domain (G, H, P, S and T)tRNA-synt_2b is a family of largely threonyl-tRNA members. Domain
A, B
PF09180Prolyl-tRNA synthetase, C-terminal (ProRS-C_1)Prolyl-tRNA synthetase, C-terminalMembers of this family are predominantly found in prokaryotic prolyl-tRNA synthetase. They contain a zinc binding site, and adopt a structure consisting of alpha helices and antiparallel beta sheets arranged in 2 layers, in a beta-alpha-beta-alpha-be ...Members of this family are predominantly found in prokaryotic prolyl-tRNA synthetase. They contain a zinc binding site, and adopt a structure consisting of alpha helices and antiparallel beta sheets arranged in 2 layers, in a beta-alpha-beta-alpha-beta motif [1].
Domain