Crystal structure of colwellia psychrerythraea strain 34H isoaspartyl dipeptidase E80Q mutant complexed with beta-isoaspartyl lysine
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | V-set | e5xgxA1 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II | H: Rubredoxin-related | T: Tetrapyrrole methylase C-terminal domain | F: V-set | ECOD (v294.1) |
| B | Glyco_transf_4 | e5xgxB1 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II | H: Rubredoxin-related | T: Tetrapyrrole methylase C-terminal domain | F: Glyco_transf_4 | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.30.40.10 | Mainly Beta | Roll | Urease, subunit C | domain 1 | CATH (4.3.0) |
| A | 3.20.20.140 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Metal-dependent hydrolases | CATH (4.3.0) |
| B | 2.30.40.10 | Mainly Beta | Roll | Urease, subunit C | domain 1 | CATH (4.3.0) |
| B | 3.20.20.140 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Metal-dependent hydrolases | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Isoaspartyl dipeptidase |
|
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR050378 | Metallo-dependent Hydrolases Superfamily | Family | |
| IPR006680 | Amidohydrolase-related | Domain | |
| IPR011059 | Metal-dependent hydrolase, composite domain superfamily | Homologous Superfamily | |
| IPR032466 | Metal-dependent hydrolase | Homologous Superfamily | |
| IPR010229 | Peptidase M38, beta-aspartyl dipeptidase | Family |














