5WVI | pdb_00005wvi

The resting state of yeast proteasome

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
I [auth n]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064012 3000131 SCOP2B (2022-06-29)
AA [auth D]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064012 3000131 SCOP2B (2022-06-29)
H [auth m]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064026 3000131 SCOP2B (2022-06-29)
BA [auth E]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064026 3000131 SCOP2B (2022-06-29)
Z [auth F]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064066 3000131 SCOP2B (2022-06-29)
G [auth l]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064066 3000131 SCOP2B (2022-06-29)
X [auth G]SCOP2B SuperfamilyClass II glutamine amidotransferases 8079169 3000131 SCOP2B (2022-06-29)
F [auth k]SCOP2B SuperfamilyClass II glutamine amidotransferases 8079169 3000131 SCOP2B (2022-06-29)
Y [auth A]SCOP2B SuperfamilyClass II glutamine amidotransferases 8036842 3000131 SCOP2B (2022-06-29)
D [auth c]SCOP2B SuperfamilyClass II glutamine amidotransferases 8036842 3000131 SCOP2B (2022-06-29)
UA [auth V]SCOP2B SuperfamilyJAB1/MPN domain-like 8053248 3001105 SCOP2B (2022-06-29)
LA [auth X]SCOP2B SuperfamilyPH domain-like 8093403 3000134 SCOP2B (2022-06-29)
SA [auth f]SCOP2B SuperfamilyClass II glutamine amidotransferases 8079504 3000131 SCOP2B (2022-06-29)
IA [auth 5]SCOP2B SuperfamilyClass II glutamine amidotransferases 8079504 3000131 SCOP2B (2022-06-29)
QA [auth b]SCOP2B SuperfamilyClass II glutamine amidotransferases 8036787 3000131 SCOP2B (2022-06-29)
EA [auth 1]SCOP2B SuperfamilyClass II glutamine amidotransferases 8036787 3000131 SCOP2B (2022-06-29)
OA [auth j]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064048 3000131 SCOP2B (2022-06-29)
DA [auth B]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064048 3000131 SCOP2B (2022-06-29)
NA [auth d]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064020 3000131 SCOP2B (2022-06-29)
CA [auth C]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064020 3000131 SCOP2B (2022-06-29)
S [auth U]SCOP2B SuperfamilyJAB1/MPN domain-like 8053272 3001105 SCOP2B (2022-06-29)
S [auth U]SCOP2B SuperfamilyEIF3 subunit F C-terminal domain-like 8053273 3002167 SCOP2B (2022-06-29)
N [auth R]SCOP2B SuperfamilyWinged helix DNA-binding domain 8057044 3000034 SCOP2B (2022-06-29)
N [auth R]SCOP2B SuperfamilyTPR-like 8057042 3001345 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth n]AHAS-like_ACTe5wvin1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
AA [auth D]AHAS-like_ACTe5wviD1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
H [auth m]AHAS-like_ACTe5wvim1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
BA [auth E]AHAS-like_ACTe5wviE1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
Z [auth F]AHAS-like_ACTe5wviF1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
G [auth l]AHAS-like_ACTe5wvil1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
X [auth G]AHAS-like_ACTe5wviG1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
F [auth k]AHAS-like_ACTe5wvik1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
GA [auth 3]AHAS-like_ACTe5wvi31 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
E [auth h]AHAS-like_ACTe5wvih1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
Y [auth A]AHAS-like_ACTe5wviA1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
D [auth c]AHAS-like_ACTe5wvic1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
UA [auth V]AHAS-like_ACTe5wviV1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
MA [auth Z]AHAS-like_ACTe5wviZ1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
LA [auth X]AHAS-like_ACTe5wviX1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
PA [auth a]AHAS-like_ACTe5wvia1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
KA [auth 7]AHAS-like_ACTe5wvi71 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
FA [auth 2]AHAS-like_ACTe5wvi21 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
C [auth i]AHAS-like_ACTe5wvii1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
RA [auth e]AHAS-like_ACTe5wvie1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
JA [auth 6]AHAS-like_ACTe5wvi61 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
SA [auth f]AHAS-like_ACTe5wvif1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
IA [auth 5]AHAS-like_ACTe5wvi51 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
TA [auth g]AHAS-like_ACTe5wvig1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
HA [auth 4]AHAS-like_ACTe5wvi41 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
QA [auth b]AHAS-like_ACTe5wvib1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
EA [auth 1]AHAS-like_ACTe5wvi11 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
OA [auth j]AHAS-like_ACTe5wvij1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
DA [auth B]AHAS-like_ACTe5wviB1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
NA [auth d]AHAS-like_ACTe5wvid1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
CA [auth C]AHAS-like_ACTe5wviC1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
W [auth H]AHAS-like_ACTe5wviH3 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
V [auth P]AHAS-like_ACTe5wviP1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
U [auth O]AHAS-like_ACTe5wviO1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
T [auth W]AHAS-like_ACTe5wviW1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
B [auth K]AARP2CNe5wviK1 A: a/b three-layered sandwichesX: Spectrin repeat-likeH: Spectrin repeatT: Spectrin repeatF: AARP2CNECOD (v294.1)
S [auth U]AHAS-like_ACTe5wviU1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
R [auth M]ThiF, E1_4HBe5wviM1 A: a/b three-layered sandwichesX: HAD domain-likeH: Class I glutamine amidotransferase-likeT: CheY-likeF: ThiF, E1_4HBECOD (v294.1)
Q [auth L]AHAS-like_ACTe5wviL1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
O [auth Q]AHAS-like_ACTe5wviQ1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
N [auth R]AHAS-like_ACTe5wviR1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
M [auth T]AHAS-like_ACTe5wviT1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
L [auth S]AHAS-like_ACTe5wviS1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
K [auth N]AHAS-like_ACTe5wviN1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)
A [auth I]AHAS-like_ACTe5wviI1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Nucleic acid-binding proteinT: Chelatase-likeF: AHAS-like_ACTECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
AA [auth D],
I [auth n]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
AA [auth D],
I [auth n]		PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
BA [auth E],
H [auth m]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
G [auth l],
Z [auth F]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
G [auth l],
Z [auth F]		PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
F [auth k],
X [auth G]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
F [auth k],
X [auth G]		PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
E [auth h],
GA [auth 3]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
D [auth c],
Y [auth A]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
D [auth c],
Y [auth A]		PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
UA [auth V]PF2359426S proteasome regulatory subunit RPN11 C-terminal domain (RPN11_C)26S proteasome regulatory subunit RPN11 C-terminal domainThis entry represents the C-terminal helical region of 26S proteosomal subunits. This region is involved in forming a helical bundle with other RPN subunits to help with assembly of the proteosome lid [1]. Domain
MA [auth Z]PF17781RPN1 N-terminal domain (RPN1_RPN2_N)RPN1 N-terminal domain- Repeat
MA [auth Z]PF01851Proteasome/cyclosome repeat (PC_rep)Proteasome/cyclosome repeat- Repeat
LA [auth X]PF04683Proteasome complex subunit Rpn13, Pru domain (Rpn13_ADRM1_Pru)Proteasome complex subunit Rpn13, Pru domainThis family was thought originally to be involved in cell-adhesion [1,2], but the members are now known to be proteasome subunit Rpn13, a novel ubiquitin receptor. The 26S proteasome is a huge macromolecular protein-degradation machine consisting of ...This family was thought originally to be involved in cell-adhesion [1,2], but the members are now known to be proteasome subunit Rpn13, a novel ubiquitin receptor. The 26S proteasome is a huge macromolecular protein-degradation machine consisting of a proteolytically active 20S core, in the form of four disc-like proteins, and one or two 19S regulatory particles. The regulatory particle(s) sit on the top and or bottom of the core, de-ubiquitinate the substrate peptides, unfold them and guide them into the narrow channel through the centre of the core. Rpn13 and its homologues dock onto the regulatory particle through the N-terminal region which binds Rpn2. The C-terminal part of the domain binds de-ubiquitinating enzyme Uch37/UCHL5 and enhances its isopeptidase activity. Rpn13 binds ubiquitin via a conserved amino-terminal region called the pleckstrin-like receptor for ubiquitin, termed Pru, domain [4]. The domain forms two contiguous anti-parallel beta-sheets with a configuration similar to the pleckstrin-homology domain (PHD) fold [5]. Rpn13's ability to bind ubiquitin and the proteasome subunit Rpn2/S1 simultaneously supports evidence of its role as a ubiquitin receptor. Finally, when complexed to di-ubiquitin, via the Pru, and Uch37 via the C-terminal part, it frees up the distal ubiquitin for de-ubiquitination by the Uch37 [5].
Domain
KA [auth 7],
PA [auth a]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
C [auth i],
FA [auth 2]		PF12465Proteasome beta subunits C terminal (Pr_beta_C)Proteasome beta subunits C terminal- Family
JA [auth 6],
RA [auth e]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
HA [auth 4],
TA [auth g]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
EA [auth 1],
QA [auth b]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
DA [auth B],
OA [auth j]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
DA [auth B],
OA [auth j]		PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
CA [auth C],
NA [auth d]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
CA [auth C],
NA [auth d]		PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
W [auth H]PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
W [auth H]PF17862AAA+ lid domain (AAA_lid_3)AAA+ lid domainThis entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. Domain
W [auth H]PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain
V [auth P]PF1809826S proteasome regulatory subunit RPN5 C-terminal domain (RPN5_C)26S proteasome regulatory subunit RPN5 C-terminal domainThis is the C-terminal domain of the 26S proteasome regulatory subunit RPN5 proteins.This helical domain can be found adjacent to Pfam:PF01399. The 26S proteasome is the major ATP-dependent protease in eukaryotes. Three subcomplexes form this degrada ...This is the C-terminal domain of the 26S proteasome regulatory subunit RPN5 proteins.This helical domain can be found adjacent to Pfam:PF01399. The 26S proteasome is the major ATP-dependent protease in eukaryotes. Three subcomplexes form this degradation machine: the lid, the base, and the core. The helices found at the C terminus of each lid subunit form a helical bundle that directs the ordered self-assembly of the lid subcomplex. This domain which comprises the tail of RPN5 along with the tail of Rpn9, are important for Rpn12 binding to the lid [1].
Domain
V [auth P]PF22241PSMD12/CSN4, N-terminal (PSMD12-CSN4_N)PSMD12/CSN4, N-terminal- Repeat
V [auth P]PF01399PCI domain (PCI)PCI domainThis domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. Domain
U [auth O]PF18261Rpn9 C-terminal helix (Rpn9_C)Rpn9 C-terminal helix- Family
U [auth O]PF22037PSD13 N-terminal repeats (PSD13_N)PSD13 N-terminal repeats- Repeat
U [auth O]PF01399PCI domain (PCI)PCI domainThis domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. Domain
T [auth W]PF13519von Willebrand factor type A domain (VWA_2)von Willebrand factor type A domainDomain
B [auth K]PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
B [auth K]PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
B [auth K]PF16450Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C)Proteasomal ATPase OB C-terminal domainThis is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] Domain
B [auth K]PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain
S [auth U]PF13012Maintenance of mitochondrial structure and function (MitMem_reg)Maintenance of mitochondrial structure and function- Family
R [auth M]PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
R [auth M]PF16450Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C)Proteasomal ATPase OB C-terminal domainThis is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] Domain
R [auth M]PF17862AAA+ lid domain (AAA_lid_3)AAA+ lid domainThis entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. Domain
R [auth M]PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain
Q [auth L]PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
Q [auth L]PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
Q [auth L]PF16450Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C)Proteasomal ATPase OB C-terminal domainThis is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] Domain
Q [auth L]PF17862AAA+ lid domain (AAA_lid_3)AAA+ lid domainThis entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. Domain
Q [auth L]PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain
P [auth J]PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
P [auth J]PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
P [auth J]PF16450Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C)Proteasomal ATPase OB C-terminal domainThis is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] Domain
P [auth J]PF17862AAA+ lid domain (AAA_lid_3)AAA+ lid domainThis entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. Domain
P [auth J]PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain
O [auth Q]PF1805526S proteasome regulatory subunit RPN6 N-terminal domain (RPN6_N)26S proteasome regulatory subunit RPN6 N-terminal domainThis is the N-terminal domain found in RPN6 proteins (26S proteasome regulatory subunit). The 26S proteasome holocomplex consists of a 28-subunit barrel-shaped core particle (CP) in the center capped at the top and bottom by 19-subunit regulatory par ...This is the N-terminal domain found in RPN6 proteins (26S proteasome regulatory subunit). The 26S proteasome holocomplex consists of a 28-subunit barrel-shaped core particle (CP) in the center capped at the top and bottom by 19-subunit regulatory particles (RPs). The CP forms the catalytic chamber and the RP is formed from two subcomplexes known as the lid and the base [1]. The lid comprises nine Rpn subunits in yeast (Rpn3/5/6/7/8/9/11/12/15) and the base comprises three Rpn subunits (Rpn1/2/13) and six ATPases (Rpt1-6) [2]. Phosphorylation of Rpn6 enhances proteasome ATPase activity and promotes the formation of doubly capped (30S) proteasome, hence accelerating the degradation of short-lived proteins [3].
Domain
O [auth Q]PF1850326S proteasome subunit RPN6 C-terminal helix domain (RPN6_C_helix)26S proteasome subunit RPN6 C-terminal helix domainThis is the C-terminal helix domain found in RPN6, a component of the 26S proteasome. The C-terminal helices are essential for lid assembly [1, 2]. Domain
O [auth Q]PF01399PCI domain (PCI)PCI domainThis domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. Domain
N [auth R]PF2115426S proteasome regulatory subunit RPN7/PSMD6 C-terminal helix (RPN7_PSMD6_C)26S proteasome regulatory subunit RPN7/PSMD6 C-terminal helixRPN7/PSDM6 are regulatory subunits from the 26S proteasome. This entry represents the C-terminal helix. Domain
N [auth R]PF1060226S proteasome subunit RPN7 (RPN7)26S proteasome subunit RPN7- Repeat
N [auth R]PF01399PCI domain (PCI)PCI domainThis domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. Domain
M [auth T]PF10075CSN8/PSMD8/EIF3K family (CSN8_PSD8_EIF3K)CSN8/PSMD8/EIF3K family- Family
L [auth S]PF08375Proteasome regulatory subunit C-terminal (Rpn3_C)Proteasome regulatory subunit C-terminal- Family
L [auth S]PF01399PCI domain (PCI)PCI domainThis domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. Domain
K [auth N]PF13646HEAT repeats (HEAT_2)HEAT repeats- Repeat
K [auth N]PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
K [auth N]PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
K [auth N]PF1800426S proteasome regulatory subunit RPN2 C-terminal domain (RPN2_C)26S proteasome regulatory subunit RPN2 C-terminal domainThis is the C-terminal domain found in S. cerevisiae Rpn2 (26S proteasome regulatory subunit RPN2) as well as other eukaryotic species. A study revealed that the C-terminal 52 residues of the Rpn2 C-terminal domain are responsible for mediating inter ...This is the C-terminal domain found in S. cerevisiae Rpn2 (26S proteasome regulatory subunit RPN2) as well as other eukaryotic species. A study revealed that the C-terminal 52 residues of the Rpn2 C-terminal domain are responsible for mediating interactions with the ubiquitin-binding subunit Rpn13. Futhermore, the extreme C-terminal 20 or 21 residues of Rpn2 (926-945 or 925-945) of S. cerevisiae, were shown to be equally effective at binding Rpn13. Multiple sequence alignments indicate that Rpn2 orthologs are highly conserved in this C-terminal region and share characteristic acidic, aromatic, and proline residues, suggesting a common function. In the structure of Rpn2 from S. cerevisiae , this region is exposed and disordered, and is thus accessible for associating with Rpn13. The Rpn2 binding surface of human Rpn13 has been mapped by nuclear magnetic resonance titration to one surface of its Pru domain [1].
Domain
K [auth N]PF2150526S proteasome subunit RPN2, N-terminal domain (RPN2_N)26S proteasome subunit RPN2, N-terminal domain- Repeat
K [auth N]PF01851Proteasome/cyclosome repeat (PC_rep)Proteasome/cyclosome repeat- Repeat
A [auth I]PF12465Proteasome beta subunits C terminal (Pr_beta_C)Proteasome beta subunits C terminal- Family
A [auth I]PF16450Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C)Proteasomal ATPase OB C-terminal domainThis is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] Domain
A [auth I]PF17862AAA+ lid domain (AAA_lid_3)AAA+ lid domainThis entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. Domain
A [auth I]PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
AA [auth D],
I [auth n]		Proteasome subunit alpha type-4-
BA [auth E],
H [auth m]		Proteasome subunit alpha type-5-
G [auth l],
Z [auth F]		Proteasome subunit alpha type-6-
F [auth k],
X [auth G]		Probable proteasome subunit alpha type-7
E [auth h],
GA [auth 3]		Proteasome subunit beta type-3
D [auth c],
Y [auth A]		Proteasome subunit alpha type-1-
UA [auth V]Ubiquitin carboxyl-terminal hydrolase RPN11
MA [auth Z]26S proteasome regulatory subunit RPN1
LA [auth X]26S proteasome regulatory subunit RPN13
KA [auth 7],
PA [auth a]		Proteasome subunit beta type-7-
C [auth i],
FA [auth 2]		Proteasome subunit beta type-2
JA [auth 6],
RA [auth e]		Proteasome subunit beta type-6-
IA [auth 5],
SA [auth f]		Proteasome subunit beta type-5
HA [auth 4],
TA [auth g]		Proteasome subunit beta type-4
EA [auth 1],
QA [auth b]		Proteasome subunit beta type-1
DA [auth B],
OA [auth j]		Proteasome subunit alpha type-2-
CA [auth C],
NA [auth d]		Proteasome subunit alpha type-3-
W [auth H]26S protease regulatory subunit 7 homolog
V [auth P]26S proteasome regulatory subunit RPN5-
U [auth O]26S proteasome regulatory subunit RPN9
T [auth W]26S proteasome regulatory subunit RPN10
B [auth K]26S protease regulatory subunit 6B homolog
S [auth U]26S proteasome regulatory subunit RPN8
R [auth M]26S protease regulatory subunit 6A
Q [auth L]26S protease subunit RPT4
P [auth J]26S protease regulatory subunit 8 homolog
O [auth Q]26S proteasome regulatory subunit RPN6
N [auth R]26S proteasome regulatory subunit RPN7
M [auth T]26S proteasome regulatory subunit RPN12-
L [auth S]26S proteasome regulatory subunit RPN3
K [auth N]26S proteasome regulatory subunit RPN2
J [auth Y]26S proteasome complex subunit SEM1
A [auth I]26S protease regulatory subunit 4 homolog

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
AA [auth D],
I [auth n]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
AA [auth D],
I [auth n]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
AA [auth D],
I [auth n]		IPR000426Proteasome alpha-subunit, N-terminal domainDomain
AA [auth D],
I [auth n]		IPR050115Proteasome subunit alphaFamily
AA [auth D],
I [auth n]		IPR023332Proteasome alpha-type subunitFamily
AA [auth D],
I [auth n]		IPR001353Proteasome, subunit alpha/betaFamily
BA [auth E],
H [auth m]		IPR033812Proteasome subunit alpha5Family
BA [auth E],
H [auth m]		IPR000426Proteasome alpha-subunit, N-terminal domainDomain
BA [auth E],
H [auth m]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
BA [auth E],
H [auth m]		IPR050115Proteasome subunit alphaFamily
BA [auth E],
H [auth m]		IPR023332Proteasome alpha-type subunitFamily
BA [auth E],
H [auth m]		IPR001353Proteasome, subunit alpha/betaFamily
G [auth l],
Z [auth F]		IPR000426Proteasome alpha-subunit, N-terminal domainDomain
G [auth l],
Z [auth F]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
G [auth l],
Z [auth F]		IPR050115Proteasome subunit alphaFamily
G [auth l],
Z [auth F]		IPR023332Proteasome alpha-type subunitFamily
G [auth l],
Z [auth F]		IPR001353Proteasome, subunit alpha/betaFamily
F [auth k],
X [auth G]		IPR000426Proteasome alpha-subunit, N-terminal domainDomain
F [auth k],
X [auth G]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
F [auth k],
X [auth G]		IPR050115Proteasome subunit alphaFamily
F [auth k],
X [auth G]		IPR023332Proteasome alpha-type subunitFamily
F [auth k],
X [auth G]		IPR001353Proteasome, subunit alpha/betaFamily
E [auth h],
GA [auth 3]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
E [auth h],
GA [auth 3]		IPR023333Proteasome B-type subunitFamily
E [auth h],
GA [auth 3]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
E [auth h],
GA [auth 3]		IPR001353Proteasome, subunit alpha/betaFamily
E [auth h],
GA [auth 3]		IPR033811Proteasome beta 3 subunitFamily
D [auth c],
Y [auth A]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
D [auth c],
Y [auth A]		IPR034642Proteasome subunit alpha6Family
D [auth c],
Y [auth A]		IPR000426Proteasome alpha-subunit, N-terminal domainDomain
D [auth c],
Y [auth A]		IPR050115Proteasome subunit alphaFamily
D [auth c],
Y [auth A]		IPR023332Proteasome alpha-type subunitFamily
D [auth c],
Y [auth A]		IPR001353Proteasome, subunit alpha/betaFamily
UA [auth V]IPR050242JAMM/MPN+ metalloenzymes, peptidase M67AFamily
UA [auth V]IPR037518MPN domainDomain
UA [auth V]IPR05626326S proteasome regulatory subunit RPN11, C-terminal domainDomain
UA [auth V]IPR000555JAB1/MPN/MOV34 metalloenzyme domainDomain
MA [auth Z]IPR04143326S proteasome non-ATPase regulatory subunit RPN1, C-terminalDomain
MA [auth Z]IPR016024Armadillo-type foldHomologous Superfamily
MA [auth Z]IPR002015Proteasome/cyclosome repeatRepeat
MA [auth Z]IPR01664326S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunitFamily
MA [auth Z]IPR011989Armadillo-like helicalHomologous Superfamily
MA [auth Z]IPR040892RPN1, N-terminalDomain
LA [auth X]IPR044868Rpn13/ADRM1, Pru domainDomain
LA [auth X]IPR006773Proteasomal ubiquitin receptor Rpn13/ADRM1Family
LA [auth X]IPR038633Proteasomal ubiquitin receptor Rpn13/ADRM1, Pru domain superfamilyHomologous Superfamily
KA [auth 7],
PA [auth a]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
KA [auth 7],
PA [auth a]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
KA [auth 7],
PA [auth a]		IPR023333Proteasome B-type subunitFamily
KA [auth 7],
PA [auth a]		IPR016295Proteasome subunit beta 4Family
KA [auth 7],
PA [auth a]		IPR001353Proteasome, subunit alpha/betaFamily
C [auth i],
FA [auth 2]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
C [auth i],
FA [auth 2]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
C [auth i],
FA [auth 2]		IPR024689Proteasome beta subunit, C-terminalDomain
C [auth i],
FA [auth 2]		IPR023333Proteasome B-type subunitFamily
C [auth i],
FA [auth 2]		IPR001353Proteasome, subunit alpha/betaFamily
C [auth i],
FA [auth 2]		IPR000243Peptidase T1A, proteasome beta-subunitFamily
JA [auth 6],
RA [auth e]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
JA [auth 6],
RA [auth e]		IPR023333Proteasome B-type subunitFamily
JA [auth 6],
RA [auth e]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
JA [auth 6],
RA [auth e]		IPR001353Proteasome, subunit alpha/betaFamily
IA [auth 5],
SA [auth f]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
IA [auth 5],
SA [auth f]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
IA [auth 5],
SA [auth f]		IPR023333Proteasome B-type subunitFamily
IA [auth 5],
SA [auth f]		IPR001353Proteasome, subunit alpha/betaFamily
IA [auth 5],
SA [auth f]		IPR000243Peptidase T1A, proteasome beta-subunitFamily
HA [auth 4],
TA [auth g]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
HA [auth 4],
TA [auth g]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
HA [auth 4],
TA [auth g]		IPR023333Proteasome B-type subunitFamily
HA [auth 4],
TA [auth g]		IPR001353Proteasome, subunit alpha/betaFamily
HA [auth 4],
TA [auth g]		IPR035206Proteasome subunit beta 2Family
EA [auth 1],
QA [auth b]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
EA [auth 1],
QA [auth b]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
EA [auth 1],
QA [auth b]		IPR023333Proteasome B-type subunitFamily
EA [auth 1],
QA [auth b]		IPR001353Proteasome, subunit alpha/betaFamily
EA [auth 1],
QA [auth b]		IPR000243Peptidase T1A, proteasome beta-subunitFamily
DA [auth B],
OA [auth j]		IPR000426Proteasome alpha-subunit, N-terminal domainDomain
DA [auth B],
OA [auth j]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
DA [auth B],
OA [auth j]		IPR050115Proteasome subunit alphaFamily
DA [auth B],
OA [auth j]		IPR023332Proteasome alpha-type subunitFamily
DA [auth B],
OA [auth j]		IPR001353Proteasome, subunit alpha/betaFamily
CA [auth C],
NA [auth d]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
CA [auth C],
NA [auth d]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
CA [auth C],
NA [auth d]		IPR000426Proteasome alpha-subunit, N-terminal domainDomain
CA [auth C],
NA [auth d]		IPR050115Proteasome subunit alphaFamily
CA [auth C],
NA [auth d]		IPR023332Proteasome alpha-type subunitFamily
CA [auth C],
NA [auth d]		IPR001353Proteasome, subunit alpha/betaFamily
W [auth H]IPR04872326S proteasome regulatory subunit 7-like, OB domainDomain
W [auth H]IPR05022126S Proteasome Regulatory ATPaseFamily
W [auth H]IPR041569AAA ATPase, AAA+ lid domainDomain
W [auth H]IPR003960ATPase, AAA-type, conserved siteConserved Site
W [auth H]IPR003593AAA+ ATPase domainDomain
W [auth H]IPR003959ATPase, AAA-type, coreDomain
W [auth H]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
W [auth H]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
V [auth P]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
V [auth P]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
V [auth P]IPR000717Proteasome component (PCI) domainDomain
V [auth P]IPR04089626S proteasome regulatory subunit RPN5, C-terminal domainDomain
V [auth P]IPR04013426S Proteasome non-ATPase regulatory subunit 12/COP9 signalosome complex subunit 4Family
V [auth P]IPR054559PSMD12/CSN4-like, N-terminalDomain
U [auth O]IPR054179PSD13, N-terminalDomain
U [auth O]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
U [auth O]IPR03529826S Proteasome non-ATPase regulatory subunit 13Family
U [auth O]IPR000717Proteasome component (PCI) domainDomain
U [auth O]IPR040798Rpn9, C-terminal helixDomain
T [auth W]IPR036465von Willebrand factor A-like domain superfamilyHomologous Superfamily
T [auth W]IPR02704026S proteasome non-ATPase regulatory subunit 4Family
T [auth W]IPR002035von Willebrand factor, type ADomain
T [auth W]IPR003903Ubiquitin interacting motifConserved Site
B [auth K]IPR05022126S Proteasome Regulatory ATPaseFamily
B [auth K]IPR032501Proteasomal ATPase, second OB domainDomain
B [auth K]IPR003960ATPase, AAA-type, conserved siteConserved Site
B [auth K]IPR003593AAA+ ATPase domainDomain
B [auth K]IPR003959ATPase, AAA-type, coreDomain
B [auth K]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
B [auth K]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
S [auth U]IPR024969EIF3F/CSN6-like, C-terminalDomain
S [auth U]IPR037518MPN domainDomain
S [auth U]IPR03385826S Proteasome non-ATPase regulatory subunit 7/8Family
S [auth U]IPR000555JAB1/MPN/MOV34 metalloenzyme domainDomain
R [auth M]IPR05022126S Proteasome Regulatory ATPaseFamily
R [auth M]IPR041569AAA ATPase, AAA+ lid domainDomain
R [auth M]IPR032501Proteasomal ATPase, second OB domainDomain
R [auth M]IPR003960ATPase, AAA-type, conserved siteConserved Site
R [auth M]IPR003593AAA+ ATPase domainDomain
R [auth M]IPR003959ATPase, AAA-type, coreDomain
R [auth M]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
R [auth M]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
Q [auth L]IPR05022126S Proteasome Regulatory ATPaseFamily
Q [auth L]IPR041569AAA ATPase, AAA+ lid domainDomain
Q [auth L]IPR032501Proteasomal ATPase, second OB domainDomain
Q [auth L]IPR003960ATPase, AAA-type, conserved siteConserved Site
Q [auth L]IPR003593AAA+ ATPase domainDomain
Q [auth L]IPR003959ATPase, AAA-type, coreDomain
Q [auth L]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
Q [auth L]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
P [auth J]IPR05022126S Proteasome Regulatory ATPaseFamily
P [auth J]IPR041569AAA ATPase, AAA+ lid domainDomain
P [auth J]IPR032501Proteasomal ATPase, second OB domainDomain
P [auth J]IPR003960ATPase, AAA-type, conserved siteConserved Site
P [auth J]IPR003593AAA+ ATPase domainDomain
P [auth J]IPR003959ATPase, AAA-type, coreDomain
P [auth J]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
P [auth J]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
O [auth Q]IPR05087126S Proteasome and COP9 Signalosome ComponentsFamily
O [auth Q]IPR0407806S proteasome subunit Rpn6, C-terminal helix domainDomain
O [auth Q]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
O [auth Q]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
O [auth Q]IPR04077326S proteasome regulatory subunit Rpn6, N-terminalDomain
O [auth Q]IPR000717Proteasome component (PCI) domainDomain
N [auth R]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
N [auth R]IPR01958526S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit 1Family
N [auth R]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
N [auth R]IPR04954926S proteasome regulatory subunit RPN7/PSMD6, C-terminal helixDomain
N [auth R]IPR000717Proteasome component (PCI) domainDomain
N [auth R]IPR04513526S proteasome regulatory subunit Rpn7, N-terminalDomain
N [auth R]IPR019734Tetratricopeptide repeatRepeat
M [auth T]IPR000717Proteasome component (PCI) domainDomain
M [auth T]IPR00674626S proteasome non-ATPase regulatory subunit Rpn12Family
M [auth T]IPR033464CSN8/PSMD8/EIF3KDomain
L [auth S]IPR000717Proteasome component (PCI) domainDomain
L [auth S]IPR01358626S proteasome non-ATPase regulatory subunit 3, C-terminalDomain
L [auth S]IPR05798526S proteasome non-ATPase regulatory subunit 3, N-terminal TPR repeatsDomain
L [auth S]IPR050756COP9 signalosome complex subunit 3Family
L [auth S]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
K [auth N]IPR04062326S proteasome regulatory subunit RPN2, C-terminalDomain
K [auth N]IPR016024Armadillo-type foldHomologous Superfamily
K [auth N]IPR002015Proteasome/cyclosome repeatRepeat
K [auth N]IPR011989Armadillo-like helicalHomologous Superfamily
K [auth N]IPR04857026S proteasome non-ATPase regulatory subunit 1/RPN2, N-terminal domainDomain
K [auth N]IPR01664226S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunitFamily
J [auth Y]IPR007834DSS1/SEM1Family
A [auth I]IPR05022126S Proteasome Regulatory ATPaseFamily
A [auth I]IPR041569AAA ATPase, AAA+ lid domainDomain
A [auth I]IPR032501Proteasomal ATPase, second OB domainDomain
A [auth I]IPR003960ATPase, AAA-type, conserved siteConserved Site
A [auth I]IPR003593AAA+ ATPase domainDomain
A [auth I]IPR003959ATPase, AAA-type, coreDomain
A [auth I]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
A [auth I]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily