5WP4

Arabidopsis thaliana phosphoethanolamine N-methyltransferase 1 (AtPMT1, XIOPTL) in complex with SAH and phosphocholine

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF13649	e5wp4A2	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: S-adenosyl-L-methionine-dependent methyltransferases	F: PF13649	ECOD (1.6)
A	PF13847	e5wp4A1	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: S-adenosyl-L-methionine-dependent methyltransferases	F: PF13847	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF13847	Methyltransferase domain (Methyltransf_31)	Methyltransferase domain	This family appears to have methyltransferase activity.	Domain
A	PF08241	Methyltransferase domain (Methyltransf_11)	Methyltransferase domain	Members of this family are SAM dependent methyltransferases.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Phosphoethanolamine N-methyltransferase 1	phosphomethylethanolamine N-methyltransferase activity transferase activity, transferring one-carbon groups N-methyltransferase activity transferase activity methyltransferase activity catalytic activity S-adenosylmethionine-dependent methyltransferase activity phosphoethanolamine N-methyltransferase activity	developmental process multi-multicellular organism process multicellular organismal process cellular developmental process pollination developmental cell growth developmental growth reproductive process growth unidimensional cell growth cell development cell tip growth developmental process involved in reproduction cell growth cell morphogenesis developmental process multi-multicellular organism process multicellular organismal process cellular developmental process pollination developmental cell growth developmental growth reproductive process growth unidimensional cell growth cell development cell tip growth developmental process involved in reproduction cell growth cell morphogenesis developmental growth involved in morphogenesis anatomical structure morphogenesis pollen tube growth cell differentiation anatomical structure development cellular process pollen tube development plant organ development post-embryonic root development multicellular organism development post-embryonic plant organ development post-embryonic development root development system development root system development cellular biosynthetic process glycerophospholipid metabolic process organonitrogen compound biosynthetic process lipid biosynthetic process phospholipid metabolic process organic substance metabolic process phosphate-containing compound metabolic process organic substance biosynthetic process phosphatidylcholine metabolic process phosphorus metabolic process organonitrogen compound metabolic process glycerophospholipid biosynthetic process cellular metabolic process primary metabolic process phospholipid biosynthetic process biosynthetic process glycerolipid biosynthetic process organophosphate metabolic process organophosphate biosynthetic process cellular lipid metabolic process metabolic process glycerolipid metabolic process phosphatidylcholine biosynthetic process lipid metabolic process methylation gametophyte development pollen development positive chemotaxis chemotaxis response to stimulus pollen tube guidance response to external stimulus taxis response to chemical locomotion choline biosynthetic process ammonium ion metabolic process biogenic amine biosynthetic process amine metabolic process amine biosynthetic process choline metabolic process biogenic amine metabolic process	intracellular anatomical structure cytoplasm cellular anatomical entity

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Homologous Superfamily
A	IPR025771	Phosphoethanolamine N-methyltransferase	Family
A	IPR025714	Methyltransferase domain	Domain
A	IPR013216	Methyltransferase type 11	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.