5WE0 | pdb_00005we0

Structural Basis for Shelterin Bridge Assembly

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
J	UNK_F_TYPE	e5we0J1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: UNK_F_TYPE	ECOD (1.6)
G	UNK_F_TYPE	e5we0G1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: UNK_F_TYPE	ECOD (1.6)
D	UNK_F_TYPE	e5we0D1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: UNK_F_TYPE	ECOD (1.6)
A	UNK_F_TYPE	e5we0A1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: UNK_F_TYPE	ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C, F, I, L	DNA-binding protein rap1	sequence-specific DNA binding DNA binding binding nucleic acid binding telomeric DNA binding	mitotic telomere clustering and tethering at nuclear periphery localization telomere localization telomere tethering at nuclear periphery chromosome localization organelle localization mitotic telomere tethering at nuclear periphery cellular response to stimulus telomere maintenance in response to DNA damage response to stimulus protection from non-homologous end joining at telomere telomere organization chromosome organization primary metabolic process mitotic telomere clustering and tethering at nuclear periphery localization telomere localization telomere tethering at nuclear periphery chromosome localization organelle localization mitotic telomere tethering at nuclear periphery cellular response to stimulus telomere maintenance in response to DNA damage response to stimulus protection from non-homologous end joining at telomere telomere organization chromosome organization primary metabolic process DNA metabolic process nucleic acid metabolic process telomere maintenance cellular component organization nucleobase-containing compound metabolic process organelle organization cellular response to stress telomere capping DNA damage response response to stress cellular process metabolic process cellular component organization or biogenesis macromolecule metabolic process telomere maintenance via telomere lengthening meiotic attachment of telomeric heterochromatin to spindle pole body meiotic chromosome segregation sexual reproduction reproductive process meiotic cell cycle process meiosis I meiotic nuclear division cell cycle chromosome segregation cell cycle process meiotic cell cycle organelle fission meiotic telomere clustering chromosome organization involved in meiotic cell cycle nuclear division chromosome localization to nuclear envelope involved in homologous chromosome segregation meiosis I cell cycle process nuclear chromosome segregation microtubule-based process homologous chromosome segregation	intracellular anatomical structure meiotic spindle pole body intracellular membraneless organelle intracellular organelle microtubule organizing center cellular anatomical structure cytoskeleton organelle membraneless organelle spindle pole body microtubule cytoskeleton membrane-bounded organelle protein-containing complex protein-DNA complex intracellular anatomical structure meiotic spindle pole body intracellular membraneless organelle intracellular organelle microtubule organizing center cellular anatomical structure cytoskeleton organelle membraneless organelle spindle pole body microtubule cytoskeleton membrane-bounded organelle protein-containing complex protein-DNA complex nucleus nuclear protein-containing complex chromosome intracellular membrane-bounded organelle chromosomal region telomere cap complex chromosome, telomeric repeat region chromosome, telomeric region shelterin complex nuclear telomere cap complex nucleus leading edge
B, E, H, K	Protection of telomeres protein tpz1	sequence-specific DNA binding DNA binding binding nucleic acid binding telomeric DNA binding	protein-containing complex organization telomere organization chromosome organization protein-DNA complex assembly cellular component organization cellular component biogenesis protein-DNA complex organization organelle organization cellular component assembly telomere-telomerase complex assembly protein-containing complex assembly cellular process cellular component organization or biogenesis primary metabolic process protein-containing complex organization telomere organization chromosome organization protein-DNA complex assembly cellular component organization cellular component biogenesis protein-DNA complex organization organelle organization cellular component assembly telomere-telomerase complex assembly protein-containing complex assembly cellular process cellular component organization or biogenesis primary metabolic process DNA metabolic process nucleic acid metabolic process telomere maintenance nucleobase-containing compound metabolic process telomere capping metabolic process macromolecule metabolic process telomere maintenance via telomerase nucleobase-containing compound biosynthetic process macromolecule biosynthetic process RNA-templated DNA biosynthetic process telomere maintenance via telomere lengthening nucleic acid biosynthetic process biosynthetic process DNA biosynthetic process localization protein localization to chromosome protein localization to organelle macromolecule localization protein localization to chromosome, telomeric region intracellular protein localization	membrane-bounded organelle protein-containing complex intracellular anatomical structure catalytic complex nucleus nuclear protein-containing complex intracellular membrane-bounded organelle intracellular organelle telomerase holoenzyme complex cellular anatomical structure organelle ribonucleoprotein complex membraneless organelle chromosome, telomeric repeat region membrane-bounded organelle protein-containing complex intracellular anatomical structure catalytic complex nucleus nuclear protein-containing complex intracellular membrane-bounded organelle intracellular organelle telomerase holoenzyme complex cellular anatomical structure organelle ribonucleoprotein complex membraneless organelle chromosome, telomeric repeat region intracellular membraneless organelle chromosome chromosome, telomeric region chromosomal region protein-DNA complex telomere cap complex shelterin complex nuclear telomere cap complex
A, D, G, J	Protection of telomeres protein poz1	DNA binding binding nucleic acid binding	telomere organization chromosome organization primary metabolic process DNA metabolic process nucleic acid metabolic process telomere maintenance cellular component organization nucleobase-containing compound metabolic process organelle organization telomere capping cellular process metabolic process cellular component organization or biogenesis macromolecule metabolic process telomere organization chromosome organization primary metabolic process DNA metabolic process nucleic acid metabolic process telomere maintenance cellular component organization nucleobase-containing compound metabolic process organelle organization telomere capping cellular process metabolic process cellular component organization or biogenesis macromolecule metabolic process telomere maintenance via telomere lengthening	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol intracellular organelle organelle membraneless organelle chromosome, telomeric repeat region intracellular membraneless organelle chromosome chromosome, telomeric region chromosomal region membrane-bounded organelle protein-containing complex cellular anatomical structure intracellular anatomical structure cytoplasm cytosol intracellular organelle organelle membraneless organelle chromosome, telomeric repeat region intracellular membraneless organelle chromosome chromosome, telomeric region chromosomal region membrane-bounded organelle protein-containing complex protein-DNA complex nucleus nuclear protein-containing complex intracellular membrane-bounded organelle telomere cap complex shelterin complex nuclear telomere cap complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C, F, I, L	IPR009057	Homedomain-like superfamily	Homologous Superfamily
C, F, I, L	IPR039595	TE2IP/Rap1	Family
C, F, I, L	IPR048929	DNA-binding protein Rap1, C-terminal, S.pombe	Domain
C, F, I, L	IPR001357	BRCT domain	Domain
C, F, I, L	IPR015280	Rap1, DNA-binding domain	Domain
C, F, I, L	IPR015010	TERF2-interacting telomeric protein 1, Myb domain	Domain
B, E, H, K	IPR028631	Adrenocortical dysplasia protein	Family
B, E, H, K	IPR019437	Shelterin complex subunit TPP1/Est3	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.