Annotations: 5WDK

A processive dipeptidyl aminopeptidase secreted from an established commensal bacterium P. distasonis

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Hemocyanin_C	e5wdkA1	A: alpha arrays	X: Surp module (SWAP domain)	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: Hemocyanin_C	ECOD (v295)
B	Hemocyanin_C	e5wdkB1	A: alpha arrays	X: Surp module (SWAP domain)	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: Hemocyanin_C	ECOD (v295)
C	Trypsin	e5wdkC1	A: alpha arrays	X: Major facilitator superfamily (MFS) general substrate transporter	H: Major facilitator superfamily (MFS) general substrate transporter	T: Major facilitator superfamily (MFS) general substrate transporter	F: Trypsin	ECOD (v295)
D	Hemocyanin_C	e5wdkD1	A: alpha arrays	X: Surp module (SWAP domain)	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: Hemocyanin_C	ECOD (v295)
E	Hemocyanin_C	e5wdkE1	A: alpha arrays	X: Surp module (SWAP domain)	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: Hemocyanin_C	ECOD (v295)
F	Trypsin	e5wdkF1	A: alpha arrays	X: Major facilitator superfamily (MFS) general substrate transporter	H: Major facilitator superfamily (MFS) general substrate transporter	T: Major facilitator superfamily (MFS) general substrate transporter	F: Trypsin	ECOD (v295)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.90.70.10	Alpha Beta	Alpha-Beta Complex	Cathepsin B	Chain A	CATH (4.3.0)
B	3.90.70.10	Alpha Beta	Alpha-Beta Complex	Cathepsin B	Chain A	CATH (4.3.0)
C	3.90.70.10	Alpha Beta	Alpha-Beta Complex	Cathepsin B	Chain A	CATH (4.3.0)
D	3.90.70.10	Alpha Beta	Alpha-Beta Complex	Cathepsin B	Chain A	CATH (4.3.0)
E	3.90.70.10	Alpha Beta	Alpha-Beta Complex	Cathepsin B	Chain A	CATH (4.3.0)
F	3.90.70.10	Alpha Beta	Alpha-Beta Complex	Cathepsin B	Chain A	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF03051	Peptidase C1-like family (Peptidase_C1_2)	Peptidase C1-like family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	Aminopeptidase C	cysteine-type peptidase activity peptidase activity catalytic activity, acting on a protein cysteine-type aminopeptidase activity aminopeptidase activity hydrolase activity cysteine-type exopeptidase activity exopeptidase activity catalytic activity cation binding ion binding binding metal ion binding small molecule binding	proteolysis metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process response to stimulus response to chemical response to toxic substance homocysteine metabolic process catabolic process oxoacid metabolic process sulfur amino acid metabolic process non-proteinogenic amino acid catabolic process proteolysis metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process response to stimulus response to chemical response to toxic substance homocysteine metabolic process catabolic process oxoacid metabolic process sulfur amino acid metabolic process non-proteinogenic amino acid catabolic process L-amino acid catabolic process carboxylic acid metabolic process amino acid metabolic process L-homocysteine catabolic process L-amino acid metabolic process sulfur compound catabolic process non-proteinogenic amino acid metabolic process sulfur amino acid catabolic process carboxylic acid catabolic process small molecule metabolic process sulfur compound metabolic process small molecule catabolic process amino acid catabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR038765	Papain-like cysteine peptidase superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR000169	Cysteine peptidase, cysteine active site	Active Site
A, B, C, D, E A, B, C, D, E, F	IPR004134	Peptidase C1B, bleomycin hydrolase	Family

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.