5W6L

Crystal Structure of RRSP, a MARTX Toxin Effector Domain from Vibrio vulnificus CMCP6


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AMLDe5w6lA1 A: alpha bundlesX: Bromodomain-likeH: PMT helical bundle domain-likeT: PMT helical bundle domain-likeF: MLDECOD (1.6)
AUNK_F_TYPEe5w6lA3 A: alpha complex topologyX: PMT central region-like (From Topology)H: PMT central region-like (From Topology)T: PMT central region-likeF: UNK_F_TYPEECOD (1.6)
AEUF08646e5w6lA2 A: a/b three-layered sandwichesX: EreA/ChaN-like (From Topology)H: EreA/ChaN-like (From Topology)T: EreA/ChaN-likeF: EUF08646ECOD (1.6)
BMLDe5w6lB2 A: alpha bundlesX: Bromodomain-likeH: PMT helical bundle domain-likeT: PMT helical bundle domain-likeF: MLDECOD (1.6)
BUNK_F_TYPEe5w6lB1 A: alpha complex topologyX: PMT central region-like (From Topology)H: PMT central region-like (From Topology)T: PMT central region-likeF: UNK_F_TYPEECOD (1.6)
BEUF08646e5w6lB3 A: a/b three-layered sandwichesX: EreA/ChaN-like (From Topology)H: EreA/ChaN-like (From Topology)T: EreA/ChaN-likeF: EUF08646ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF20899Pasteurella multocida toxin, C2 domain (PMT_C2)Pasteurella multocida toxin, C2 domainPasteurella multocida toxin (PMT) inhibits osteoblastic differentiation in mammals and birds. Its N-terminal region binds to target cells, while its C-terminal region, with a Trojan horse-like shape, carries the intracellularly active moiety. The lat ...Pasteurella multocida toxin (PMT) inhibits osteoblastic differentiation in mammals and birds. Its N-terminal region binds to target cells, while its C-terminal region, with a Trojan horse-like shape, carries the intracellularly active moiety. The latter consists of three distinct domains: C1 (Pfam:PF11647), C2 and C3. This entry represents the larger of these domains, the central region C2, which has 18 helices and nine beta-strands and is organised into two subdomains with typical alpha-beta structures characteristic of nucleotide-binding proteins [1]. This domain is also found in the Ras/Rap1-specific endopeptidase (RRSP), an effector domain from the multifunctional-autoprocessing repeats-in- toxin (MARTX) toxin from Vibrio vulnificus responsible for the disruption of host innate immune defenses during infection [2,3].
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR048461Dermonecrotic toxin-like, C2 domainDomain