Crystal Structure of HPV16 L1 Pentamer Bound to Heparin Oligosaccharides
External Resource: Annotation
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
A | d5w1oa1 | All beta proteins | Nucleoplasmin-like/VP (viral coat and capsid proteins) | Group I dsDNA viruses | Papovaviridae-like VP | automated matches | (Human papillomavirus ) [TaxId: 10566 ], (Human papillomavirus ) [TaxId: 10566 ], | SCOPe (2.08) |
A | d5w1oa2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Human papillomavirus ) [TaxId: 10566 ], (Human papillomavirus ) [TaxId: 10566 ], | SCOPe (2.08) |
B | d5w1ob1 | All beta proteins | Nucleoplasmin-like/VP (viral coat and capsid proteins) | Group I dsDNA viruses | Papovaviridae-like VP | automated matches | (Human papillomavirus ) [TaxId: 10566 ], (Human papillomavirus ) [TaxId: 10566 ], | SCOPe (2.08) |
B | d5w1ob2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Human papillomavirus ) [TaxId: 10566 ], (Human papillomavirus ) [TaxId: 10566 ], | SCOPe (2.08) |
C | d5w1oc1 | All beta proteins | Nucleoplasmin-like/VP (viral coat and capsid proteins) | Group I dsDNA viruses | Papovaviridae-like VP | automated matches | (Human papillomavirus ) [TaxId: 10566 ], (Human papillomavirus ) [TaxId: 10566 ], | SCOPe (2.08) |
C | d5w1oc2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Human papillomavirus ) [TaxId: 10566 ], (Human papillomavirus ) [TaxId: 10566 ], | SCOPe (2.08) |
D | d5w1od1 | All beta proteins | Nucleoplasmin-like/VP (viral coat and capsid proteins) | Group I dsDNA viruses | Papovaviridae-like VP | automated matches | (Human papillomavirus ) [TaxId: 10566 ], (Human papillomavirus ) [TaxId: 10566 ], | SCOPe (2.08) |
D | d5w1od2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Human papillomavirus ) [TaxId: 10566 ], (Human papillomavirus ) [TaxId: 10566 ], | SCOPe (2.08) |
E | d5w1oe1 | All beta proteins | Nucleoplasmin-like/VP (viral coat and capsid proteins) | Group I dsDNA viruses | Papovaviridae-like VP | automated matches | (Human papillomavirus ) [TaxId: 10566 ], (Human papillomavirus ) [TaxId: 10566 ], | SCOPe (2.08) |
E | d5w1oe2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Human papillomavirus ) [TaxId: 10566 ], (Human papillomavirus ) [TaxId: 10566 ], | SCOPe (2.08) |
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
A | PF00500 | e5w1oA1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00500 | ECOD (1.6) |
B | PF00500 | e5w1oB1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00500 | ECOD (1.6) |
C | PF00500 | e5w1oC1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00500 | ECOD (1.6) |
D | PF00500 | e5w1oD1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00500 | ECOD (1.6) |
E | PF00500 | e5w1oE1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00500 | ECOD (1.6) |
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
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| Major capsid protein L1 | | | |