5VXY | pdb_00005vxy

Cryo-EM reconstruction of PAK pilus from Pseudomonas aeruginosa


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
USCOP2B SuperfamilyPili subunits 8033645 3000097 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyPili subunits 8033645 3000097 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyPili subunits 8033645 3000097 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyPili subunits 8033645 3000097 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyPili subunits 8033645 3000097 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyPili subunits 8033645 3000097 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyPili subunits 8033645 3000097 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyPili subunits 8033645 3000097 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyPili subunits 8033645 3000097 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyPili subunits 8033645 3000097 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyPili subunits 8033645 3000097 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyPili subunits 8033645 3000097 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyPili subunits 8033645 3000097 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyPili subunits 8033645 3000097 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyPili subunits 8033645 3000097 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyPili subunits 8033645 3000097 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyPili subunits 8033645 3000097 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyPili subunits 8033645 3000097 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyPili subunits 8033645 3000097 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyPili subunits 8033645 3000097 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyPili subunits 8033645 3000097 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
UTubulin_Ce5vxyU1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
TTubulin_Ce5vxyT1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
STubulin_Ce5vxyS1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
RTubulin_Ce5vxyR1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
QTubulin_Ce5vxyQ1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
PTubulin_Ce5vxyP1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
OTubulin_Ce5vxyO1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
NTubulin_Ce5vxyN1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
MTubulin_Ce5vxyM1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
LTubulin_Ce5vxyL1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
KTubulin_Ce5vxyK1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
JTubulin_Ce5vxyJ1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
ITubulin_Ce5vxyI1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
HTubulin_Ce5vxyH1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
GTubulin_Ce5vxyG1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
FTubulin_Ce5vxyF1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
ETubulin_Ce5vxyE1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
DTubulin_Ce5vxyD1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
CTubulin_Ce5vxyC1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
BTubulin_Ce5vxyB1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
ATubulin_Ce5vxyA1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Fimbrial protein-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR012902Prokaryotic N-terminal methylation sitePTM
A, B, C, D, E
IPR001082Fimbrial protein pilinFamily
A, B, C, D, E
IPR045584Pilin-likeHomologous Superfamily

Membrane Protein Annotation: OPM OPM Database Homepage

ChainsExternal LinkTypeClassSuperfamilyFamily
A, B, C, D, E
OPMTransmembraneBitopic proteinsType IV pilinBacterial pilin