5VXX | pdb_00005vxx

Cryo-EM reconstruction of Neisseria gonorrhoeae Type IV pilus


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
USCOP2B SuperfamilyPili subunits 8034848 3000097 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyPili subunits 8034848 3000097 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyPili subunits 8034848 3000097 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyPili subunits 8034848 3000097 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyPili subunits 8034848 3000097 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyPili subunits 8034848 3000097 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyPili subunits 8034848 3000097 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyPili subunits 8034848 3000097 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyPili subunits 8034848 3000097 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyPili subunits 8034848 3000097 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyPili subunits 8034848 3000097 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyPili subunits 8034848 3000097 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyPili subunits 8034848 3000097 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyPili subunits 8034848 3000097 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyPili subunits 8034848 3000097 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyPili subunits 8034848 3000097 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyPili subunits 8034848 3000097 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyPili subunits 8034848 3000097 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyPili subunits 8034848 3000097 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyPili subunits 8034848 3000097 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyPili subunits 8034848 3000097 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
UTubulin_Ce5vxxU1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
TTubulin_Ce5vxxT1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
STubulin_Ce5vxxS1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
RTubulin_Ce5vxxR1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
QTubulin_Ce5vxxQ1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
PTubulin_Ce5vxxP1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
OTubulin_Ce5vxxO1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
NTubulin_Ce5vxxN1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
MTubulin_Ce5vxxM1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
LTubulin_Ce5vxxL1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
KTubulin_Ce5vxxK1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
JTubulin_Ce5vxxJ1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
ITubulin_Ce5vxxI1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
HTubulin_Ce5vxxH1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
GTubulin_Ce5vxxG1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
FTubulin_Ce5vxxF1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
ETubulin_Ce5vxxE1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
DTubulin_Ce5vxxD1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
CTubulin_Ce5vxxC1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
BTubulin_Ce5vxxB1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)
ATubulin_Ce5vxxA1 A: a/b three-layered sandwichesX: gH main domainH: gH main domainT: gH main domainF: Tubulin_CECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Fimbrial protein-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR012902Prokaryotic N-terminal methylation sitePTM
A, B, C, D, E
IPR001082Fimbrial protein pilinFamily
A, B, C, D, E
IPR045584Pilin-likeHomologous Superfamily

Membrane Protein Annotation: OPM OPM Database Homepage

ChainsExternal LinkTypeClassSuperfamilyFamily
A, B, C, D, E
OPMTransmembraneBitopic proteinsType IV pilinBacterial pilin