5V6J

Glycan binding protein Y3 from mushroom Coprinus comatus possesses anti-leukemic activity

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF22803e5v6jA1 A: a+b two layersX: Yeast killer toxin-likeH: Yeast killer toxin-like (From Topology)T: Yeast killer toxin-likeF: PF22803ECOD (1.6)
BPF22803e5v6jB1 A: a+b two layersX: Yeast killer toxin-likeH: Yeast killer toxin-like (From Topology)T: Yeast killer toxin-likeF: PF22803ECOD (1.6)
CPF22803e5v6jC1 A: a+b two layersX: Yeast killer toxin-likeH: Yeast killer toxin-like (From Topology)T: Yeast killer toxin-likeF: PF22803ECOD (1.6)
DPF22803e5v6jD1 A: a+b two layersX: Yeast killer toxin-likeH: Yeast killer toxin-like (From Topology)T: Yeast killer toxin-likeF: PF22803ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF22803Glycan binding domain Y3 (GBD_Y3)Glycan binding domain Y3This entry represents the domain present in the glycan-binding protein Y3 from Coprinus comatus (pdb: 5v6i). The structure of this domain is characterized by an alpha-beta-alpha sandwich motif, which includes three alpha-helices and a five-stranded b ...This entry represents the domain present in the glycan-binding protein Y3 from Coprinus comatus (pdb: 5v6i). The structure of this domain is characterized by an alpha-beta-alpha sandwich motif, which includes three alpha-helices and a five-stranded beta-sheet. Typically, this domain is characterized by the presence of four intramolecular disulfide bridges [1].
Domain

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, B, C, D
PCA Parent Component: GLN

RESID:  AA0031

PSI-MOD :  2-pyrrolidone-5-carboxylic acid (Gln) MOD:00040 , 2-pyrrolidone-5-carboxylic acid (Glu) MOD:00420