VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| Y [auth M] | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8041903 | 3001763 | SCOP2B (2022-06-29) |
| W [auth N] | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8041903 | 3001763 | SCOP2B (2022-06-29) |
| U [auth L] | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8041903 | 3001763 | SCOP2B (2022-06-29) |
| S [auth K] | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8041903 | 3001763 | SCOP2B (2022-06-29) |
| Q [auth T] | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8041903 | 3001763 | SCOP2B (2022-06-29) |
| O [auth E] | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8041903 | 3001763 | SCOP2B (2022-06-29) |
| MA [auth A] | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8041903 | 3001763 | SCOP2B (2022-06-29) |
| M [auth S] | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8041903 | 3001763 | SCOP2B (2022-06-29) |
| KA [auth J] | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8041903 | 3001763 | SCOP2B (2022-06-29) |
| K [auth D] | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8041903 | 3001763 | SCOP2B (2022-06-29) |
| IA [auth O] | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8041903 | 3001763 | SCOP2B (2022-06-29) |
| I [auth R] | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8041903 | 3001763 | SCOP2B (2022-06-29) |
| GA [auth I] | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8041903 | 3001763 | SCOP2B (2022-06-29) |
| G [auth C] | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8041903 | 3001763 | SCOP2B (2022-06-29) |
| EA [auth H] | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8041903 | 3001763 | SCOP2B (2022-06-29) |
| E [auth Q] | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8041903 | 3001763 | SCOP2B (2022-06-29) |
| CA [auth G] | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8041903 | 3001763 | SCOP2B (2022-06-29) |
| C [auth B] | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8041903 | 3001763 | SCOP2B (2022-06-29) |
| AA [auth F] | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8041903 | 3001763 | SCOP2B (2022-06-29) |
| A [auth P] | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8041903 | 3001763 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| Z [auth m] | Glyco_hydro_77 | e5uk4m1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| X [auth n] | Glyco_hydro_77 | e5uk4n1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| V [auth l] | Glyco_hydro_77 | e5uk4l1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| T [auth k] | Glyco_hydro_77 | e5uk4k1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| R [auth t] | Glyco_hydro_77 | e5uk4t1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| P [auth e] | Glyco_hydro_77 | e5uk4e1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| NA [auth a] | Glyco_hydro_77 | e5uk4a1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| N [auth s] | Glyco_hydro_77 | e5uk4s1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| LA [auth j] | Glyco_hydro_77 | e5uk4j1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| L [auth d] | Glyco_hydro_77 | e5uk4d1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| JA [auth o] | Glyco_hydro_77 | e5uk4o1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| J [auth r] | Glyco_hydro_77 | e5uk4r1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| HA [auth i] | Glyco_hydro_77 | e5uk4i1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| H [auth c] | Glyco_hydro_77 | e5uk4c1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| FA [auth h] | Glyco_hydro_77 | e5uk4h1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| F [auth q] | Glyco_hydro_77 | e5uk4q1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| DA [auth g] | Glyco_hydro_77 | e5uk4g1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| D [auth b] | Glyco_hydro_77 | e5uk4b1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| BA [auth f] | Glyco_hydro_77 | e5uk4f1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| B [auth p] | Glyco_hydro_77 | e5uk4p1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| Y [auth M] | Glyco_hydro_77 | e5uk4M1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| W [auth N] | Glyco_hydro_77 | e5uk4N1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| U [auth L] | Glyco_hydro_77 | e5uk4L1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| S [auth K] | Glyco_hydro_77 | e5uk4K1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| Q [auth T] | Glyco_hydro_77 | e5uk4T1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| O [auth E] | Glyco_hydro_77 | e5uk4E1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| MA [auth A] | Glyco_hydro_77 | e5uk4A1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| M [auth S] | Glyco_hydro_77 | e5uk4S1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| KA [auth J] | Glyco_hydro_77 | e5uk4J1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| K [auth D] | Glyco_hydro_77 | e5uk4D1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| IA [auth O] | Glyco_hydro_77 | e5uk4O1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| I [auth R] | Glyco_hydro_77 | e5uk4R1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| GA [auth I] | Glyco_hydro_77 | e5uk4I1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| G [auth C] | Glyco_hydro_77 | e5uk4C1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| EA [auth H] | Glyco_hydro_77 | e5uk4H1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| E [auth Q] | Glyco_hydro_77 | e5uk4Q1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| CA [auth G] | Glyco_hydro_77 | e5uk4G1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| C [auth B] | Glyco_hydro_77 | e5uk4B1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| AA [auth F] | Glyco_hydro_77 | e5uk4F1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
| A [auth P] | Glyco_hydro_77 | e5uk4P1 | A: beta barrels | X: HAD domain-like | H: beta-propeller | T: 8-bladed | F: Glyco_hydro_77 | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
SAbDab Antibody Annotation SAbDab Database Homepage
| Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
|---|---|---|---|---|---|
| Heavy Chain | IGHV1 | - | anti-vesicular stomatitis virus n vhh | SAbDab (2026-05-15) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00945 | Rhabdovirus nucleocapsid protein (Rhabdo_ncap) | Rhabdovirus nucleocapsid protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| OA [auth u], PA [auth v], QA [auth w], RA [auth x] | RNA (45-MER) | - | - | - |
| Anti-vesicular stomatitis virus N VHH | - | |||
| Nucleoprotein |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR050199 | Immunoglobulin Heavy Variable | Family | |
| IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
| IPR036179 | Immunoglobulin-like domain superfamily | Homologous Superfamily | |
| IPR013106 | Immunoglobulin V-set domain | Domain | |
| IPR003599 | Immunoglobulin domain subtype | Domain | |
| IPR007110 | Immunoglobulin-like domain | Domain | |
| IPR035961 | Rhabdovirus nucleoprotein-like | Homologous Superfamily | |
| IPR000448 | Rhabdovirus nucleocapsid | Domain | |
| IPR023330 | Rhabdovirus nucleocapsid, N-terminal | Homologous Superfamily | |
| IPR023331 | Rhabdovirus nucleocapsid, C-terminal | Homologous Superfamily |














