5UBQ | pdb_00005ubq

Cryo-EM structure of ciliary microtubule doublet


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth D]Tubulin_Ce5ubqD2 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
B [auth D]Tubuline5ubqD1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)
D [auth F]Tubulin_Ce5ubqF2 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
D [auth F]Tubuline5ubqF1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)
F [auth B]Tubulin_Ce5ubqB2 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
F [auth B]Tubuline5ubqB1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)
A [auth C]Tubulin_Ce5ubqC1 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
A [auth C]Tubuline5ubqC2 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)
C [auth E]Tubulin_Ce5ubqE1 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
C [auth E]Tubuline5ubqE2 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)
E [auth A]Tubulin_Ce5ubqA1 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
E [auth A]Tubuline5ubqA2 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth D],
D [auth F],
F [auth B]
Tubulin beta chain
A [auth C],
C [auth E],
E [auth A]
Tubulin alpha chain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth D],
D [auth F],
F [auth B]
IPR003008Tubulin/FtsZ, GTPase domainDomain
B [auth D],
D [auth F],
F [auth B]
IPR008280Tubulin/FtsZ, C-terminalHomologous Superfamily
B [auth D],
D [auth F],
F [auth B]
IPR037103Tubulin/FtsZ-like, C-terminal domainHomologous Superfamily
B [auth D],
D [auth F],
F [auth B]
IPR017975Tubulin, conserved siteConserved Site
B [auth D],
D [auth F],
F [auth B]
IPR000217TubulinFamily
B [auth D],
D [auth F],
F [auth B]
IPR023123Tubulin, C-terminalHomologous Superfamily
B [auth D],
D [auth F],
F [auth B]
IPR002453Beta tubulinFamily
B [auth D],
D [auth F],
F [auth B]
IPR013838Beta tubulin, autoregulation binding siteBinding Site
B [auth D],
D [auth F],
F [auth B]
IPR018316Tubulin/FtsZ, 2-layer sandwich domainDomain
B [auth D],
D [auth F],
F [auth B]
IPR036525Tubulin/FtsZ, GTPase domain superfamilyHomologous Superfamily
A [auth C],
C [auth E],
E [auth A]
IPR003008Tubulin/FtsZ, GTPase domainDomain
A [auth C],
C [auth E],
E [auth A]
IPR008280Tubulin/FtsZ, C-terminalHomologous Superfamily
A [auth C],
C [auth E],
E [auth A]
IPR037103Tubulin/FtsZ-like, C-terminal domainHomologous Superfamily
A [auth C],
C [auth E],
E [auth A]
IPR017975Tubulin, conserved siteConserved Site
A [auth C],
C [auth E],
E [auth A]
IPR002452Alpha tubulinFamily
A [auth C],
C [auth E],
E [auth A]
IPR000217TubulinFamily
A [auth C],
C [auth E],
E [auth A]
IPR023123Tubulin, C-terminalHomologous Superfamily
A [auth C],
C [auth E],
E [auth A]
IPR018316Tubulin/FtsZ, 2-layer sandwich domainDomain
A [auth C],
C [auth E],
E [auth A]
IPR036525Tubulin/FtsZ, GTPase domain superfamilyHomologous Superfamily