Annotations: 5U9P

Crystal structure of a gluconate 5-dehydrogenase from Burkholderia cenocepacia J2315 in complex with NADP and tartrate

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d5u9pd_	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	automated matches	automated matches	(Burkholderia cenocepacia J2315 ) [TaxId: 216591 ],	SCOPe (2.08)
C	d5u9pc_	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	automated matches	automated matches	(Burkholderia cenocepacia J2315 ) [TaxId: 216591 ],	SCOPe (2.08)
B	d5u9pb1	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	automated matches	automated matches	(Burkholderia cenocepacia J2315 ) [TaxId: 216591 ],	SCOPe (2.08)
B	d5u9pb2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Burkholderia cenocepacia J2315 ) [TaxId: 216591 ],	SCOPe (2.08)
A	d5u9pa1	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	automated matches	automated matches	(Burkholderia cenocepacia J2315 ) [TaxId: 216591 ],	SCOPe (2.08)
A	d5u9pa2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Burkholderia cenocepacia J2315 ) [TaxId: 216591 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	SDR-like	8063248	3000038	SCOP2B (2022-06-29)
C	SCOP2 Family	Short-chain dehydrogenases/reductases, SDR	8063247	4000029	SCOP2 (2022-06-29)
C	SCOP2 Superfamily	SDR-like	8063248	3000038	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	SDR-like	8063248	3000038	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	SDR-like	8063248	3000038	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	DHHA1	e5u9pD1	A: alpha arrays	X: Alpha-crystallin B chain N-terminal domain	H: profilin-like	T: C-terminal domain in DHH phosphoesterases	F: DHHA1	ECOD (v295.2)
C	DHHA1	e5u9pC1	A: alpha arrays	X: Alpha-crystallin B chain N-terminal domain	H: profilin-like	T: C-terminal domain in DHH phosphoesterases	F: DHHA1	ECOD (v295.2)
B	DHHA1	e5u9pB1	A: alpha arrays	X: Alpha-crystallin B chain N-terminal domain	H: profilin-like	T: C-terminal domain in DHH phosphoesterases	F: DHHA1	ECOD (v295.2)
A	DHHA1	e5u9pA1	A: alpha arrays	X: Alpha-crystallin B chain N-terminal domain	H: profilin-like	T: C-terminal domain in DHH phosphoesterases	F: DHHA1	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
C	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
B	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
A	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Gluconate 5-dehydrogenase	oxidoreductase activity oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor oxidoreductase activity, acting on CH-OH group of donors gluconate 5-dehydrogenase [NAD(P)+] activity catalytic activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR036291	NAD(P)-binding domain superfamily	Homologous Superfamily
A, B, C, D	IPR002347	Short-chain dehydrogenase/reductase SDR	Family
A, B, C, D	IPR020904	Short-chain dehydrogenase/reductase, conserved site	Conserved Site

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