5T7C | pdb_00005t7c

Solution structure of calcium free, myristoylated visinin-like protein 3

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Protein Modification Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d5t7ca_	All alpha proteins	EF Hand-like	EF-hand	automated matches	automated matches	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Calmodulin-like	8062938	4000924	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	EF-hand	8062939	3001983	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	EF-hand_7_2	e5t7cA2	A: alpha arrays	X: EF-hand	H: EF-hand-related	T: EF-hand	F: EF-hand_7_2	ECOD (1.6)
A	EF-hand_7_10	e5t7cA1	A: alpha arrays	X: EF-hand	H: EF-hand-related	T: EF-hand	F: EF-hand_7_10	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF13499	EF-hand domain pair (EF-hand_7)	EF-hand domain pair		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Hippocalcin-like protein 1	cation binding ion binding binding calcium ion binding metal ion binding small molecule binding	cellular response to stimulus regulation of biological process regulation of signaling regulation of cellular process response to stimulus signaling biological regulation regulation of signal transduction cell communication regulation of response to stimulus regulation of cell communication cellular process signal transduction	cellular anatomical structure membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR028846	Recoverin family	Family
A	IPR018247	EF-Hand 1, calcium-binding site	Binding Site
A	IPR002048	EF-hand domain	Domain
A	IPR011992	EF-hand domain pair	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: P37235	Liver Cirrhosis, Experimental subependymal giant cell astrocytoma astrocytic tumor glioblastoma lung adenocarcinoma malignant ependymoma medulloblastoma ovarian cancer primitive neuroectodermal tumor ulcerative colitis atypical teratoid rhabdoid tumor large cell medulloblastoma lung cancer malignant glioma non-small cell lung carcinoma Liver Cirrhosis, Experimental subependymal giant cell astrocytoma astrocytic tumor glioblastoma lung adenocarcinoma malignant ependymoma medulloblastoma ovarian cancer primitive neuroectodermal tumor ulcerative colitis atypical teratoid rhabdoid tumor large cell medulloblastoma lung cancer malignant glioma non-small cell lung carcinoma pilocytic astrocytoma rheumatoid arthritis cystic fibrosis lung carcinoma malignant mesothelioma oligodendroglioma pituitary cancer

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A	MYR	RESID: AA0059 , AA0307 PSI-MOD : N-myristoylglycine MOD:00068 , S-myristoyl-L-cysteine MOD:00312

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.