5OPX | pdb_00005opx

Crystal structure of the GroEL mutant A109C in complex with GroES and ADP BeF2


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
NSCOP2B SuperfamilyGroEL apical domain-like 8043929 3000963 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyGroEL-intermediate domain like 8032390 3001087 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyGroEL equatorial domain-like 8032389 3001651 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyGroEL equatorial domain-like 8032389 3001651 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyGroEL-intermediate domain like 8032390 3001087 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyGroEL apical domain-like 8043929 3000963 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyGroEL equatorial domain-like 8032389 3001651 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyGroEL-intermediate domain like 8032390 3001087 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyGroEL equatorial domain-like 8032389 3001651 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyGroEL-intermediate domain like 8032390 3001087 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyGroEL-intermediate domain like 8032390 3001087 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyGroEL-intermediate domain like 8032390 3001087 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyGroEL apical domain-like 8043929 3000963 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyGroEL equatorial domain-like 8032389 3001651 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyGroEL equatorial domain-like 8032389 3001651 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyGroEL apical domain-like 8043929 3000963 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyGroEL equatorial domain-like 8032389 3001651 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyGroEL-intermediate domain like 8032390 3001087 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyGroEL-intermediate domain like 8032390 3001087 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyGroEL equatorial domain-like 8032389 3001651 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyGroEL equatorial domain-like 8032389 3001651 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyGroEL-intermediate domain like 8032390 3001087 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyGroEL-intermediate domain like 8032390 3001087 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyGroEL apical domain-like 8043929 3000963 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyGroEL equatorial domain-like 8032389 3001651 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyGroEL-intermediate domain like 8032390 3001087 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyGroEL equatorial domain-like 8032389 3001651 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyGroEL equatorial domain-like 8032389 3001651 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyGroEL apical domain-like 8043929 3000963 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyGroEL-intermediate domain like 8032390 3001087 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyGroEL-intermediate domain like 8032390 3001087 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyGroEL equatorial domain-like 8032389 3001651 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyGroEL apical domain-like 8043929 3000963 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyGroEL-intermediate domain like 8032390 3001087 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyGroEL equatorial domain-like 8032389 3001651 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyGroEL-intermediate domain like 8032390 3001087 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyGroEL equatorial domain-like 8032389 3001651 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyGroEL-intermediate domain like 8032390 3001087 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyGroEL apical domain-like 8043929 3000963 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyGroEL equatorial domain-like 8032389 3001651 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyGroEL-intermediate domain like 8032390 3001087 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyGroEL-intermediate domain like 8032390 3001087 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyGroEL equatorial domain-like 8032389 3001651 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyGroEL apical domain-like 8043929 3000963 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyGroEL equatorial domain-like 8032389 3001651 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyGroEL equatorial domain-like 8032389 3001651 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyGroEL-intermediate domain like 8032390 3001087 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyGroEL equatorial domain-like 8032389 3001651 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyGroEL-intermediate domain like 8032390 3001087 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyGroEL apical domain-like 8043929 3000963 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyGroEL equatorial domain-like 8032389 3001651 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyGroEL-intermediate domain like 8032390 3001087 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyGroEL-intermediate domain like 8032390 3001087 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyGroEL equatorial domain-like 8032389 3001651 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyGroEL apical domain-like 8043929 3000963 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyGroEL apical domain-like 8043929 3000963 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyGroEL equatorial domain-like 8032389 3001651 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyGroEL equatorial domain-like 8032389 3001651 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyGroEL-intermediate domain like 8032390 3001087 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyGroEL-intermediate domain like 8032390 3001087 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGroEL-intermediate domain like 8032390 3001087 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGroEL apical domain-like 8043929 3000963 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGroEL-intermediate domain like 8032390 3001087 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGroEL equatorial domain-like 8032389 3001651 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGroEL equatorial domain-like 8032389 3001651 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyGroEL-intermediate domain like 8032390 3001087 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyGroEL equatorial domain-like 8032389 3001651 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyGroEL-intermediate domain like 8032390 3001087 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyGroEL equatorial domain-like 8032389 3001651 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyGroEL apical domain-like 8043929 3000963 SCOP2B (2022-06-29)
Z [auth X]SCOP2B SuperfamilyGroES-like 8002348 3000002 SCOP2B (2022-06-29)
Y [auth W]SCOP2B SuperfamilyGroES-like 8002348 3000002 SCOP2B (2022-06-29)
X [auth V]SCOP2B SuperfamilyGroES-like 8002348 3000002 SCOP2B (2022-06-29)
W [auth U]SCOP2B SuperfamilyGroES-like 8002348 3000002 SCOP2B (2022-06-29)
V [auth T]SCOP2B SuperfamilyGroES-like 8002348 3000002 SCOP2B (2022-06-29)
U [auth S]SCOP2B SuperfamilyGroES-like 8002348 3000002 SCOP2B (2022-06-29)
T [auth R]SCOP2B SuperfamilyGroES-like 8002348 3000002 SCOP2B (2022-06-29)
S [auth Q]SCOP2B SuperfamilyGroES-like 8002348 3000002 SCOP2B (2022-06-29)
R [auth P]SCOP2B SuperfamilyGroES-like 8002348 3000002 SCOP2B (2022-06-29)
Q [auth O]SCOP2B SuperfamilyGroES-like 8002348 3000002 SCOP2B (2022-06-29)
P [auth 2]SCOP2B SuperfamilyGroES-like 8002348 3000002 SCOP2B (2022-06-29)
O [auth 1]SCOP2B SuperfamilyGroES-like 8002348 3000002 SCOP2B (2022-06-29)
BA [auth Z]SCOP2B SuperfamilyGroES-like 8002348 3000002 SCOP2B (2022-06-29)
AA [auth Y]SCOP2B SuperfamilyGroES-like 8002348 3000002 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
NSBP_bac_1e5opxN1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: SBP_bac_1ECOD (v294.1)
MSBP_bac_1e5opxM1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: SBP_bac_1ECOD (v294.1)
LSBP_bac_1e5opxL1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: SBP_bac_1ECOD (v294.1)
KSBP_bac_1e5opxK1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: SBP_bac_1ECOD (v294.1)
JSBP_bac_1e5opxJ1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: SBP_bac_1ECOD (v294.1)
ISBP_bac_1e5opxI1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: SBP_bac_1ECOD (v294.1)
HSBP_bac_1e5opxH1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: SBP_bac_1ECOD (v294.1)
GSBP_bac_1e5opxG1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: SBP_bac_1ECOD (v294.1)
FSBP_bac_1e5opxF1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: SBP_bac_1ECOD (v294.1)
ESBP_bac_1e5opxE1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: SBP_bac_1ECOD (v294.1)
DSBP_bac_1e5opxD1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: SBP_bac_1ECOD (v294.1)
CSBP_bac_1e5opxC1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: SBP_bac_1ECOD (v294.1)
BSBP_bac_1e5opxB1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: SBP_bac_1ECOD (v294.1)
ASBP_bac_1e5opxA1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: SBP_bac_1ECOD (v294.1)
Z [auth X]SBP_bac_1e5opxX1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: SBP_bac_1ECOD (v294.1)
Y [auth W]SBP_bac_1e5opxW1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: SBP_bac_1ECOD (v294.1)
X [auth V]SBP_bac_1e5opxV1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: SBP_bac_1ECOD (v294.1)
W [auth U]SBP_bac_1e5opxU1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: SBP_bac_1ECOD (v294.1)
V [auth T]SBP_bac_1e5opxT1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: SBP_bac_1ECOD (v294.1)
U [auth S]SBP_bac_1e5opxS1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: SBP_bac_1ECOD (v294.1)
T [auth R]SBP_bac_1e5opxR1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: SBP_bac_1ECOD (v294.1)
S [auth Q]SBP_bac_1e5opxQ1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: SBP_bac_1ECOD (v294.1)
R [auth P]Prenyltransfe5opxP1 A: a/b three-layered sandwichesX: Protein kinase/SAICAR synthase/ATP-graspH: Protein kinase/SAICAR synthase/ATP-graspT: Undecaprenyl diphosphate synthaseF: PrenyltransfECOD (v294.1)
Q [auth O]SBP_bac_1e5opxO1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: SBP_bac_1ECOD (v294.1)
P [auth 2]SBP_bac_1e5opx21 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: SBP_bac_1ECOD (v294.1)
O [auth 1]SBP_bac_1e5opx11 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: SBP_bac_1ECOD (v294.1)
BA [auth Z]SBP_bac_1e5opxZ1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: SBP_bac_1ECOD (v294.1)
AA [auth Y]SBP_bac_1e5opxY1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: SBP_bac_1ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
N1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
N3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
M1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
M3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
L1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
L3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
K1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
K3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
J1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
J3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
I1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
I3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
H1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
H3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
G1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
G3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
F1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
F3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
E1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
E3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
D1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
D3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
C1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
C3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
B1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
B3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
A1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
A3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
Z [auth X]2.30.33.40 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10 Chain OCATH (4.3.0)
Y [auth W]2.30.33.40 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10 Chain OCATH (4.3.0)
X [auth V]2.30.33.40 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10 Chain OCATH (4.3.0)
W [auth U]2.30.33.40 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10 Chain OCATH (4.3.0)
V [auth T]2.30.33.40 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10 Chain OCATH (4.3.0)
U [auth S]2.30.33.40 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10 Chain OCATH (4.3.0)
T [auth R]2.30.33.40 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10 Chain OCATH (4.3.0)
S [auth Q]2.30.33.40 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10 Chain OCATH (4.3.0)
R [auth P]2.30.33.40 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10 Chain OCATH (4.3.0)
Q [auth O]2.30.33.40 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10 Chain OCATH (4.3.0)
P [auth 2]2.30.33.40 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10 Chain OCATH (4.3.0)
O [auth 1]2.30.33.40 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10 Chain OCATH (4.3.0)
BA [auth Z]2.30.33.40 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10 Chain OCATH (4.3.0)
AA [auth Y]2.30.33.40 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10 Chain OCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00118TCP-1/cpn60 chaperonin family (Cpn60_TCP1)TCP-1/cpn60 chaperonin family- Family
PF00166Chaperonin 10 Kd subunit (Cpn10)Chaperonin 10 Kd subunitThis family contains GroES and Gp31-like chaperonins. Gp31 is a functional co-chaperonin that is required for the folding and assembly of Gp23, a major capsid protein, during phage morphogenesis [1]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
60 kDa chaperonin
10 kDa chaperonin

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR027413GroEL-like equatorial domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR027410TCP-1-like chaperonin intermediate domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR001844Chaperonin Cpn60/GroELFamily
A, B, C, D, E
IPR018370Chaperonin Cpn60, conserved siteConserved Site
A, B, C, D, E
IPR027409GroEL-like apical domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR002423Chaperonin Cpn60/GroEL/TCP-1 familyFamily
IPR018369Chaperonin GroES, conserved siteConserved Site
IPR011032GroES-like superfamilyHomologous Superfamily
IPR037124GroES chaperonin superfamilyHomologous Superfamily
IPR020818GroES chaperonin familyFamily