5OBB | pdb_00005obb

Structure of a modified mouse H chain ferritin with a lanthanide binding motif in complex with Terbium


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Xd5obbx1 All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Xd5obbx2 Artifacts Tags Tags Tags C-terminal Tags Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Wd5obbw1 All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Wd5obbw2 Artifacts Tags Tags Tags C-terminal Tags Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Vd5obbv1 All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Vd5obbv2 Artifacts Tags Tags Tags C-terminal Tags Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ud5obbu1 All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ud5obbu2 Artifacts Tags Tags Tags C-terminal Tags Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Td5obbt1 All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Td5obbt2 Artifacts Tags Tags Tags C-terminal Tags Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Sd5obbs1 All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Sd5obbs2 Artifacts Tags Tags Tags C-terminal Tags Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Rd5obbr1 All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Rd5obbr2 Artifacts Tags Tags Tags C-terminal Tags Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Qd5obbq1 All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Qd5obbq2 Artifacts Tags Tags Tags C-terminal Tags Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Pd5obbp1 All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Pd5obbp2 Artifacts Tags Tags Tags C-terminal Tags Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Od5obbo1 All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Od5obbo2 Artifacts Tags Tags Tags C-terminal Tags Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Nd5obbn_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Md5obbm1 All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Md5obbm2 Artifacts Tags Tags Tags C-terminal Tags Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ld5obbl1 All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ld5obbl2 Artifacts Tags Tags Tags C-terminal Tags Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Kd5obbk1 All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Kd5obbk2 Artifacts Tags Tags Tags C-terminal Tags Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Jd5obbj1 All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Jd5obbj2 Artifacts Tags Tags Tags C-terminal Tags Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Id5obbi1 All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Id5obbi2 Artifacts Tags Tags Tags C-terminal Tags Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Hd5obbh1 All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Hd5obbh2 Artifacts Tags Tags Tags C-terminal Tags Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Gd5obbg1 All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Gd5obbg2 Artifacts Tags Tags Tags C-terminal Tags Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Fd5obbf1 All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Fd5obbf2 Artifacts Tags Tags Tags C-terminal Tags Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ed5obbe_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Dd5obbd_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Cd5obbc_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Bd5obbb1 All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Bd5obbb2 Artifacts Tags Tags Tags C-terminal Tags Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ad5obba1 All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ad5obba2 Artifacts Tags Tags Tags C-terminal Tags Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
XSCOP2B SuperfamilyFerritin-like 8063904 3001658 SCOP2B (2022-06-29)
WSCOP2B SuperfamilyFerritin-like 8063904 3001658 SCOP2B (2022-06-29)
VSCOP2B SuperfamilyFerritin-like 8063904 3001658 SCOP2B (2022-06-29)
USCOP2B SuperfamilyFerritin-like 8063904 3001658 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyFerritin-like 8063904 3001658 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyFerritin-like 8063904 3001658 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyFerritin-like 8063904 3001658 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyFerritin-like 8063904 3001658 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyFerritin-like 8063904 3001658 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyFerritin-like 8063904 3001658 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyFerritin-like 8063904 3001658 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyFerritin-like 8063904 3001658 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyFerritin-like 8063904 3001658 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyFerritin-like 8063904 3001658 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyFerritin-like 8063904 3001658 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyFerritin-like 8063904 3001658 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyFerritin-like 8063904 3001658 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyFerritin-like 8063904 3001658 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyFerritin-like 8063904 3001658 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyFerritin-like 8063904 3001658 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyFerritin-like 8063904 3001658 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyFerritin-like 8063904 3001658 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyFerritin-like 8063904 3001658 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyFerritin-like 8063904 3001658 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
XAnoctamine5obbX1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
WAnoctamine5obbW1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
VAnoctamine5obbV1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
UAnoctamine5obbU1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
TC1-sete5obbT1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: ADP-ribosylationT: ADP-ribosylationF: C1-setECOD (v294.1)
SAnoctamine5obbS1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
RAnoctamine5obbR1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
QAnoctamine5obbQ1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
PAnoctamine5obbP1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
OAnoctamine5obbO1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
NAnoctamine5obbN1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
MAnoctamine5obbM1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
LAnoctamine5obbL1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
KAnoctamine5obbK1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
JAnoctamine5obbJ1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
IAnoctamine5obbI1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
HAnoctamine5obbH1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
GAnoctamine5obbG1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
FAnoctamine5obbF1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
EAnoctamine5obbE1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
DAnoctamine5obbD1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
CAnoctamine5obbC1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
BAnoctamine5obbB1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
AAnoctamine5obbA1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
X1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
W1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
V1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
U1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
T1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
S1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
R1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
Q1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
P1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
O1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
N1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
M1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
L1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
K1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
J1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
I1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
H1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
G1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
F1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
E1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
D1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
C1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
B1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
A1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00210Ferritin-like domain (Ferritin)Ferritin-like domainThis family contains ferritins and other ferritin-like proteins such as members of the DPS family and bacterioferritins. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Ferritin heavy chain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR009040Ferritin-like diiron domainDomain
A, B, C, D, E
IPR012347Ferritin-likeHomologous Superfamily
A, B, C, D, E
IPR009078Ferritin-like superfamilyHomologous Superfamily
A, B, C, D, E
IPR008331Ferritin/DPS domainDomain
A, B, C, D, E
IPR001519FerritinFamily
A, B, C, D, E
IPR014034Ferritin, conserved siteConserved Site