5OAK | pdb_00005oak

Structure of the dmPar3 PDZ1 domain in complex with the dmPar6 PBM

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	PilO	e5oakC1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: PilO	ECOD (v294.1)
A	PilO	e5oakA1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: PilO	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF00595	PDZ domain (PDZ)	PDZ domain	PDZ domains are found in diverse signaling proteins.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Bazooka, isoform C,LD29223p	ion binding binding anion binding phosphatidylinositol binding small molecule binding phosphatidic acid binding phospholipid binding lipid binding	regulation of cellular process sexual reproduction cellular developmental process reproductive process negative regulation of biological process cell development cellular process involved in reproduction in multicellular organism developmental process involved in reproduction female gamete generation epithelial cell differentiation border follicle cell delamination negative regulation of cell adhesion gamete generation follicle cell of egg chamber development cell adhesion regulation of cellular process sexual reproduction cellular developmental process reproductive process negative regulation of biological process cell development cellular process involved in reproduction in multicellular organism developmental process involved in reproduction female gamete generation epithelial cell differentiation border follicle cell delamination negative regulation of cell adhesion gamete generation follicle cell of egg chamber development cell adhesion cell-cell adhesion cell differentiation negative regulation of cellular process anatomical structure development regulation of cell-cell adhesion developmental process regulation of biological process epithelium development regulation of cell adhesion biological regulation oogenesis multicellular organismal reproductive process tissue development epithelial cell development negative regulation of cell-cell adhesion cellular process germ cell development delamination Malpighian tubule development multicellular organismal process tube development animal organ development renal system development multicellular organism development renal tubule development system development neuroblast proliferation cell population proliferation neuroblast division nervous system development asymmetric cell division generation of neurons neurogenesis asymmetric neuroblast division cell division neural precursor cell proliferation cell fate commitment localization apical protein localization macromolecule localization intracellular protein localization embryonic morphogenesis embryo development gastrulation germ-band extension anatomical structure morphogenesis gastrulation with mouth forming first gastrulation involving germ band extension adherens junction organization adherens junction assembly apical junction assembly cellular component organization cellular component biogenesis cell junction organization cellular component assembly cell junction assembly cellular component organization or biogenesis zonula adherens assembly cell-cell junction assembly cell-cell junction organization follicle cell of egg chamber-cell adhesion epithelial cell-cell adhesion asymmetric protein localization involved in cell fate determination cell fate determination axis elongation developmental growth growth developmental growth involved in morphogenesis establishment of cell polarity establishment or maintenance of cell polarity filopodium assembly regulation of cellular component organization cell projection organization negative regulation of filopodium assembly regulation of filopodium assembly plasma membrane bounded cell projection assembly negative regulation of plasma membrane bounded cell projection assembly negative regulation of cell projection organization plasma membrane bounded cell projection organization negative regulation of cellular component organization regulation of cell projection organization regulation of cell projection assembly regulation of cellular component biogenesis regulation of plasma membrane bounded cell projection assembly cell projection assembly regulation of plasma membrane bounded cell projection organization branching morphogenesis of an epithelial tube morphogenesis of an epithelium tissue morphogenesis branching involved in open tracheal system development tube morphogenesis morphogenesis of a branching structure respiratory system development epithelial tube morphogenesis open tracheal system development morphogenesis of a branching epithelium photoreceptor cell differentiation cell morphogenesis involved in neuron differentiation cell morphogenesis photoreceptor cell morphogenesis neuron differentiation neuron development photoreceptor cell development establishment or maintenance of bipolar cell polarity establishment of monopolar cell polarity establishment or maintenance of monopolar cell polarity establishment of apical/basal cell polarity establishment or maintenance of apical/basal cell polarity organelle organization microtubule cytoskeleton organization microtubule-based process cytoskeleton organization germarium-derived oocyte fate determination oocyte fate determination germarium-derived egg chamber formation germarium-derived oocyte differentiation anatomical structure formation involved in morphogenesis oocyte differentiation cellular response to stimulus positive regulation of cell communication positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction cell communication positive regulation of response to stimulus signal transduction positive regulation of cellular process regulation of signaling cell surface receptor signaling pathway Notch signaling pathway regulation of response to stimulus regulation of Notch signaling pathway regulation of cell communication positive regulation of Notch signaling pathway positive regulation of signaling oocyte development cell maturation establishment or maintenance of microtubule cytoskeleton polarity establishment or maintenance of cytoskeleton polarity oocyte construction developmental maturation anatomical structure maturation oocyte microtubule cytoskeleton organization synapse organization synapse assembly tissue migration ameboidal-type cell migration epithelial cell migration cell migration cell motility follicle cell of egg chamber migration epithelium migration border follicle cell migration establishment of organelle localization cellular localization centrosome localization organelle localization establishment of localization in cell microtubule organizing center localization establishment of centrosome localization establishment of localization blastoderm segmentation anterior/posterior pattern specification anterior/posterior axis specification, embryo segmentation pattern specification process tripartite regional subdivision embryonic axis specification anterior/posterior axis specification embryonic pattern specification oocyte axis specification oocyte anterior/posterior axis specification regionalization maternal determination of anterior/posterior axis, embryo axis specification establishment or maintenance of epithelial cell apical/basal polarity establishment of planar polarity regulation of animal organ morphogenesis regulation of developmental process regulation of establishment of planar polarity establishment of tissue polarity morphogenesis of a polarized epithelium animal organ morphogenesis regulation of anatomical structure morphogenesis	cell periphery cell cortex cellular anatomical structure intracellular anatomical structure cytoplasm apical part of cell membrane plasma membrane plasma membrane region apical plasma membrane cell-cell junction apical junction complex adherens junction anchoring junction cell periphery cell cortex cellular anatomical structure intracellular anatomical structure cytoplasm apical part of cell membrane plasma membrane plasma membrane region apical plasma membrane cell-cell junction apical junction complex adherens junction anchoring junction cell junction zonula adherens protein kinase complex transferase complex, transferring phosphorus-containing groups PAR polarity complex protein-containing complex catalytic complex serine/threonine protein kinase complex transferase complex cytoplasmic side of apical plasma membrane cytoplasmic side of membrane side of membrane cytoplasmic side of plasma membrane spot adherens junction

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR021922	Par3/HAL, N-terminal	Domain
A, B, C, D	IPR052213	Partitioning defective 3 homolog	Family
A, B, C, D	IPR036034	PDZ superfamily	Homologous Superfamily
A, B, C, D	IPR001478	PDZ domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.