Annotations: 5N6Y

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B [auth E]	SCOP2B Superfamily	Helical backbone metal receptor	8098532	3001679	SCOP2B (2022-06-29)
E [auth B]	SCOP2B Superfamily	Helical backbone metal receptor	8098532	3001679	SCOP2B (2022-06-29)
A	SCOP2 Family	Nitrogenase iron-molybdenum protein	8069054	4000849	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Helical backbone metal receptor	8069055	3001679	SCOP2 (2022-06-29)
D	SCOP2B Superfamily	Helical backbone metal receptor	8069055	3001679	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B [auth E]	PF00148	e5n6yE2	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Chelatase-like	F: PF00148	ECOD (1.6)
E [auth B]	PF00148	e5n6yB1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Chelatase-like	F: PF00148	ECOD (1.6)
C	PF03139	e5n6yC1	A: alpha arrays	X: Nitrogenase vanadium-iron protein delta chain (From Topology)	H: Nitrogenase vanadium-iron protein delta chain (From Topology)	T: Nitrogenase vanadium-iron protein delta chain	F: PF03139	ECOD (1.6)
F	PF03139	e5n6yF1	A: alpha arrays	X: Nitrogenase vanadium-iron protein delta chain (From Topology)	H: Nitrogenase vanadium-iron protein delta chain (From Topology)	T: Nitrogenase vanadium-iron protein delta chain	F: PF03139	ECOD (1.6)
A	PF00148	e5n6yA3	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Chelatase-like	F: PF00148	ECOD (1.6)
D	PF00148	e5n6yD2	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Chelatase-like	F: PF00148	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B [auth E]	3.40.50.1980	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Nitrogenase molybdenum iron protein domain	CATH (4.3.0)
E [auth B]	3.40.50.1980	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Nitrogenase molybdenum iron protein domain	CATH (4.3.0)
A	3.40.50.1980	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Nitrogenase molybdenum iron protein domain	CATH (4.3.0)
D	3.40.50.1980	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Nitrogenase molybdenum iron protein domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B [auth E], E [auth B]	PF00148	Nitrogenase component 1 type Oxidoreductase (Oxidored_nitro)	Nitrogenase component 1 type Oxidoreductase	-	Domain
C, F	PF03139	Vanadium/alternative nitrogenase delta subunit (AnfG_VnfG)	Vanadium/alternative nitrogenase delta subunit	-	Family
A, D	PF00148	Nitrogenase component 1 type Oxidoreductase (Oxidored_nitro)	Nitrogenase component 1 type Oxidoreductase	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth E], E [auth B]	Nitrogenase vanadium-iron protein beta chain	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding iron-sulfur cluster binding metal cluster binding oxidoreductase activity oxidoreductase activity, acting on iron-sulfur proteins as donors catalytic activity carbonyl sulfide nitrogenase activity oxidoreductase activity, acting on iron-sulfur proteins as donors, dinitrogen as acceptor cation binding metal ion binding nitrogenase activity	nitrogen cycle metabolic process metabolic process nitrogen fixation	protein-containing complex catalytic complex nitrogenase complex vanadium-iron nitrogenase complex oxidoreductase complex intracellular protein-containing complex
C, F	Nitrogenase vanadium-iron protein delta chain	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding iron-sulfur cluster binding metal cluster binding oxidoreductase activity oxidoreductase activity, acting on iron-sulfur proteins as donors catalytic activity carbonyl sulfide nitrogenase activity oxidoreductase activity, acting on iron-sulfur proteins as donors, dinitrogen as acceptor cation binding metal ion binding nitrogenase activity	nitrogen cycle metabolic process metabolic process nitrogen fixation	-
A, D	Nitrogenase vanadium-iron protein alpha chain	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding iron-sulfur cluster binding metal cluster binding vanadium ion binding cation binding transition metal ion binding metal ion binding oxidoreductase activity oxidoreductase activity, acting on iron-sulfur proteins as donors catalytic activity carbonyl sulfide nitrogenase activity oxidoreductase activity, acting on iron-sulfur proteins as donors, dinitrogen as acceptor nitrogenase activity	nitrogen cycle metabolic process metabolic process nitrogen fixation	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth E], E [auth B]	IPR000510	Nitrogenase/oxidoreductase, component 1	Domain
B [auth E], E [auth B]	IPR000318	Nitrogenase component 1, conserved site	Conserved Site
B [auth E], E [auth B]	IPR014281	Nitrogenase vanadium-iron protein beta chain	Family
C, F	IPR014279	Nitrogenase vanadium-iron, delta subunit	Family
C, F	IPR004349	Vanadium/alternative nitrogenase delta subunit	Family
A, D	IPR000510	Nitrogenase/oxidoreductase, component 1	Domain
A, D	IPR010142	Nitrogenase vanadium-iron protein, alpha chain	Family
A, D	IPR000318	Nitrogenase component 1, conserved site	Conserved Site
A, D	IPR010143	Nitrogenase component 1, alpha chain	Family
A, D	IPR005974	Nitrogenase alpha chain	Family

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.