5N5P | pdb_00005n5p

Crystal structure of Ruminococcus flavefaciens' type III complex containing the fifth cohesin from scaffoldin B and the dockerin from scaffoldin A

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DDockerin_1e5n5pD1 A: alpha arraysX: EF-handH: EF-hand-relatedT: Type I dockerin domainF: Dockerin_1ECOD (1.6)
BDockerin_1e5n5pB1 A: alpha arraysX: EF-handH: EF-hand-relatedT: Type I dockerin domainF: Dockerin_1ECOD (1.6)
CCohesine5n5pC1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: CohesinECOD (1.6)
ACohesine5n5pA1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: CohesinECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B, D
Putative cellulosomal scaffoldin protein -
A, C
Putative cellulosomal scaffoldin protein

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B, D
IPR018247EF-Hand 1, calcium-binding siteBinding Site
B, D
IPR036439Dockerin domain superfamilyHomologous Superfamily
B, D
IPR008965CBM2/CBM3, carbohydrate-binding domain superfamilyHomologous Superfamily
A, C
IPR036439Dockerin domain superfamilyHomologous Superfamily
A, C
IPR008965CBM2/CBM3, carbohydrate-binding domain superfamilyHomologous Superfamily
A, C
IPR002102Cellulosome anchoring protein, cohesin domainDomain