5N5E | pdb_00005n5e

Crystal structure of encapsulated ferritin domain from Pyrococcus furiosus PFC_05175

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
Z	ferrit_encaps	e5n5eZ1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
Y	ferrit_encaps	e5n5eY1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
X	ferrit_encaps	e5n5eX1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
W	ferrit_encaps	e5n5eW1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
V	ferrit_encaps	e5n5eV1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
U	ferrit_encaps	e5n5eU1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
T	ferrit_encaps	e5n5eT1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
S [auth R]	ferrit_encaps	e5n5eR1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
R [auth Q]	ferrit_encaps	e5n5eQ1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
Q [auth P]	ferrit_encaps	e5n5eP1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
P [auth O]	ferrit_encaps	e5n5eO1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
O [auth N]	ferrit_encaps	e5n5eN1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
N [auth M]	ferrit_encaps	e5n5eM1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
M [auth L]	ferrit_encaps	e5n5eL1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
L [auth K]	ferrit_encaps	e5n5eK1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
K [auth J]	ferrit_encaps	e5n5eJ1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
J [auth I]	ferrit_encaps	e5n5eI1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
I [auth H]	ferrit_encaps	e5n5eH1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
H [auth G]	ferrit_encaps	e5n5eG1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
G [auth F]	ferrit_encaps	e5n5eF1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
F [auth E]	ferrit_encaps	e5n5eE1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
E [auth D]	ferrit_encaps	e5n5eD1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
DA [auth d]	ferrit_encaps	e5n5ed1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
D [auth C]	ferrit_encaps	e5n5eC1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
CA [auth c]	ferrit_encaps	e5n5ec1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
C [auth B]	ferrit_encaps	e5n5eB1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
BA [auth b]	ferrit_encaps	e5n5eb1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
B [auth A]	ferrit_encaps	e5n5eA1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
AA [auth a]	ferrit_encaps	e5n5ea1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
A [auth e]	ferrit_encaps	e5n5ee1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth e], AA [auth a], B [auth A], BA [auth b], C [auth B], A [auth e], AA [auth a], B [auth A], BA [auth b], C [auth B], CA [auth c], D [auth C], DA [auth d], E [auth D], F [auth E], G [auth F], H [auth G], I [auth H], J [auth I], K [auth J], L [auth K], M [auth L], N [auth M], O [auth N], P [auth O], Q [auth P], R [auth Q], S [auth R], T, U, V, W, X, Y, Z	PF02915	Rubrerythrin (Rubrerythrin)	Rubrerythrin	This domain has a ferritin-like fold.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth e], AA [auth a], B [auth A], BA [auth b], C [auth B], A [auth e], AA [auth a], B [auth A], BA [auth b], C [auth B], CA [auth c], D [auth C], DA [auth d], E [auth D], F [auth E], G [auth F], H [auth G], I [auth H], J [auth I], K [auth J], L [auth K], M [auth L], N [auth M], O [auth N], P [auth O], Q [auth P], R [auth Q], S [auth R], T, U, V, W, X, Y, Z	PFC_05175	oxidoreductase activity catalytic activity cation binding ion binding binding metal ion binding small molecule binding	intracellular iron ion homeostasis inorganic ion homeostasis cellular homeostasis chemical homeostasis homeostatic process intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis localization transport iron ion transport transition metal ion transport intracellular iron ion homeostasis inorganic ion homeostasis cellular homeostasis chemical homeostasis homeostatic process intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis localization transport iron ion transport transition metal ion transport monoatomic ion transport monoatomic cation transport establishment of localization metal ion transport	intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle encapsulin nanocompartment

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth e], AA [auth a], B [auth A], BA [auth b], C [auth B], A [auth e], AA [auth a], B [auth A], BA [auth b], C [auth B], CA [auth c], D [auth C], DA [auth d], E [auth D], F [auth E], G [auth F], H [auth G], I [auth H], J [auth I], K [auth J], L [auth K], M [auth L], N [auth M], O [auth N], P [auth O], Q [auth P], R [auth Q], S [auth R], T, U, V, W, X, Y, Z	IPR009078	Ferritin-like superfamily	Homologous Superfamily
A [auth e], AA [auth a], B [auth A], BA [auth b], C [auth B], A [auth e], AA [auth a], B [auth A], BA [auth b], C [auth B], CA [auth c], D [auth C], DA [auth d], E [auth D], F [auth E], G [auth F], H [auth G], I [auth H], J [auth I], K [auth J], L [auth K], M [auth L], N [auth M], O [auth N], P [auth O], Q [auth P], R [auth Q], S [auth R], T, U, V, W, X, Y, Z	IPR007544	Type 1 encapsulin shell protein	Family
A [auth e], AA [auth a], B [auth A], BA [auth b], C [auth B], A [auth e], AA [auth a], B [auth A], BA [auth b], C [auth B], CA [auth c], D [auth C], DA [auth d], E [auth D], F [auth E], G [auth F], H [auth G], I [auth H], J [auth I], K [auth J], L [auth K], M [auth L], N [auth M], O [auth N], P [auth O], Q [auth P], R [auth Q], S [auth R], T, U, V, W, X, Y, Z	IPR051429	Encapsulin nanocompartment	Family
A [auth e], AA [auth a], B [auth A], BA [auth b], C [auth B], A [auth e], AA [auth a], B [auth A], BA [auth b], C [auth B], CA [auth c], D [auth C], DA [auth d], E [auth D], F [auth E], G [auth F], H [auth G], I [auth H], J [auth I], K [auth J], L [auth K], M [auth L], N [auth M], O [auth N], P [auth O], Q [auth P], R [auth Q], S [auth R], T, U, V, W, X, Y, Z	IPR003251	Rubrerythrin, diiron-binding domain	Domain