Annotations: 5MQC

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF08762	e5mqcA1	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: PF08762	ECOD (1.6)
B [auth C]	PF00073	e5mqcC1	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: PF00073	ECOD (1.6)
C [auth B]	PF00073	e5mqcB1	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: PF00073	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B [auth C]	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
C [auth B]	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF08762	CRPV capsid protein like (CRPV_capsid)	CRPV capsid protein like	This is a family of capsid proteins found in positive stranded ssRNA viruses such as cricket paralysis virus (CRPV). It forms an all beta sheet structure [1].	Domain
C [auth B]	PF00073	picornavirus capsid protein (Rhv)	picornavirus capsid protein	CAUTION: This alignment is very weak. It can not be generated by clustalw. If a representative set is used for a seed, many so-called members are not recognised. The family should probably be split up into sub-families. Capsid proteins of picornavi ...	CAUTION: This alignment is very weak. It can not be generated by clustalw. If a representative set is used for a seed, many so-called members are not recognised. The family should probably be split up into sub-families. Capsid proteins of picornaviruses. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids. They include rhinovirus (common cold) and poliovirus. Common structure is an 8-stranded beta sandwich. Variations (one or two extra strands) occur.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	VP1	structural molecule activity	-	-
B [auth C]	VP3	structural molecule activity	-	-
C [auth B]	VP2	structural molecule activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR014872	Dicistrovirus, capsid-polyprotein, C-terminal	Domain
A	IPR029053	Viral coat protein subunit	Homologous Superfamily
A	IPR001676	Picornavirus capsid	Domain
A	IPR033703	Picornavirus/Calicivirus coat protein	Domain
B [auth C]	IPR014872	Dicistrovirus, capsid-polyprotein, C-terminal	Domain
B [auth C]	IPR029053	Viral coat protein subunit	Homologous Superfamily
B [auth C]	IPR001676	Picornavirus capsid	Domain
B [auth C]	IPR033703	Picornavirus/Calicivirus coat protein	Domain
C [auth B]	IPR014872	Dicistrovirus, capsid-polyprotein, C-terminal	Domain
C [auth B]	IPR029053	Viral coat protein subunit	Homologous Superfamily
C [auth B]	IPR001676	Picornavirus capsid	Domain
C [auth B]	IPR033703	Picornavirus/Calicivirus coat protein	Domain

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.