Structure of black queen cell virus
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C [auth B] | Rhv_4 | e5mqcB1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Rhv_4 | ECOD (1.6) |
| B [auth C] | Rhv_4 | e5mqcC1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Rhv_4 | ECOD (1.6) |
| A | UNK_F_TYPE | e5mqcA1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: UNK_F_TYPE | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C [auth B] | 2.60.120.20 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
| B [auth C] | 2.60.120.20 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| C [auth B] | VP2 | - | ||
| B [auth C] | VP3 | - | ||
| VP1 | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| C [auth B] | IPR014872 | Dicistrovirus, capsid-polyprotein, C-terminal | Domain |
| C [auth B] | IPR029053 | Viral coat protein subunit | Homologous Superfamily |
| C [auth B] | IPR001676 | Picornavirus capsid | Domain |
| C [auth B] | IPR033703 | Picornavirus/Calicivirus coat protein | Domain |
| B [auth C] | IPR014872 | Dicistrovirus, capsid-polyprotein, C-terminal | Domain |
| B [auth C] | IPR029053 | Viral coat protein subunit | Homologous Superfamily |
| B [auth C] | IPR001676 | Picornavirus capsid | Domain |
| B [auth C] | IPR033703 | Picornavirus/Calicivirus coat protein | Domain |
| IPR014872 | Dicistrovirus, capsid-polyprotein, C-terminal | Domain | |
| IPR029053 | Viral coat protein subunit | Homologous Superfamily | |
| IPR001676 | Picornavirus capsid | Domain | |
| IPR033703 | Picornavirus/Calicivirus coat protein | Domain |
